Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00006 ATGAGAAAGTGGGGAAAGTGGGTTGCTGAAATTAGGGAACCTAATAAGCGTTCAAGGATTTGGTTAGGTTCTTATTCCACTCCTGTCGCCGCCGCTAGAGCCTACGACACCGCCGTTTTCTATCTCCGGGGACCTTCTGCGCGTCTTAACTTCCCGGAGCTTCTCACCGGAGAAGCCCCCGCCGTACTCGCCGGTTGCGACATGTCGGCGGCTACTATCAGGAAGAAAGCCACCGAGGTCGGTGCTAGAGTTGATGCTCTTCAAGCCACCCTTCACCACCACCACCCTCGTGTGGCGCCGTCGCCGGAGCTTCTCTCAGATGGAGGAGGCGGAGGGTCTGGGGATTTTGCGGAGCGGGTTGACCTGAACAAGATACCCGAACCTGAGAGTTCGGACTGTGAGTGGGATGTGAATTGA 417 0.5659 MRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLTGEAPAVLAGCDMSAATIRKKATEVGARVDALQATLHHHHPRVAPSPELLSDGGGGGSGDFAERVDLNKIPEPESSDCEWDVN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00006 138 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sebi167g00006 138 MobiDBLite consensus disorder prediction 93 138 - -
Sebi167g00006 138 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sebi167g00006 138 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 132 - -
Sebi167g00006 138 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Sebi167g00006 138 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Sebi167g00006 138 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Sebi167g00006 138 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Sebi167g00006 138 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00006 Sebi-Chr167 84710 85126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00006 1 136 AP2-EREBP Transcription Factor Family AT5G67190 57.862 8.76e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi167g00006 AP2 2.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00006 K09286 - gmx:100783682 228.024