Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00137 ATGGCCAACCTTTCTAATTCGAAGATCGTTGACTGTGACGGTGAAGATCACAAGAAATTAGCAGAATTAGAATTAGAAGATGAAGAATGCTTCTCGTATGCTATGCAGCTTTGCAACTCTGTTGTTCTTCCCATGGCACTGAAATCCGCAACTGAGCTGGGCGTATTTGACGTCTTGCAAAAAGCGGGTAGAGATGCTAAGCTCTCTTCCAAGGAGATTGCGTCTAAGCTTTCCTGCAACAATCCACAAGCAGCCGCAATGTCCCAGCTGAAGGATGCGATTCGGGAAGGGGGTATTCCATTCAACAGAGTTCATGGAACACATGCCTTTGAGTATCCGAGCTTGGACTCCAGGTTCAATCAACTCTTTAATACAGCAATGATCAATCACACCACTTTAATTATGAAAAAGGTTCTTGAATGCTACAAAGGTTTTGAGGGCATAAAAAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACATGATCACTTCCAAATATCCTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTCATACAACACGCCCCTTCCTATCCTGGAGTGGAACACGTTGGCGGCGATATGTTTGAAAGTGTGCCAAAAGGAGATGCCATCTTCATGAAGTGGATACTTCACGATTGGAGTGATGAGCATTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCTAATGATGGGAAAGTGATAGTGGTGGAGGCAGTTCTTCCTATTATACCTGAGAATAATGCTGCTTGGAAGTGTGTCTCCCAAACCGATGTTCTGATGATGACTCAAAACCCGGGAGGGAAGGAGCGATCTGAGCAACAATTCATGGAACTTGCAACTGCAGCTGGATTTAGTGGCATTAAATATGGATGTCGTGTTCGTACCTTCTGGGTTATGGAGTTCTTCAAGTAA 933 0.4373 MANLSNSKIVDCDGEDHKKLAELELEDEECFSYAMQLCNSVVLPMALKSATELGVFDVLQKAGRDAKLSSKEIASKLSCNNPQAAAMSQLKDAIREGGIPFNRVHGTHAFEYPSLDSRFNQLFNTAMINHTTLIMKKVLECYKGFEGIKRLVDVGGGLGININMITSKYPHIQGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPNDGKVIVVEAVLPIIPENNAAWKCVSQTDVLMMTQNPGGKERSEQQFMELATAAGFSGIKYGCRVRTFWVMEFFK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00137 310 FunFam Caffeic acid O-methyltransferase 66 310 - -
Sebi166g00137 310 Pfam Dimerisation domain 45 87 IPR012967 GO:0046983
Sebi166g00137 310 PANTHER O-METHYLTRANSFERASE 34 89 IPR016461 GO:0008168
Sebi166g00137 310 Pfam O-methyltransferase domain 88 292 IPR001077 GO:0008171
Sebi166g00137 310 Gene3D Vaccinia Virus protein VP39 110 310 IPR029063 -
Sebi166g00137 310 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 310 IPR016461 GO:0008168
Sebi166g00137 310 Gene3D - 13 91 IPR036388 -
Sebi166g00137 310 PIRSF O-mtase 83 310 IPR016461 GO:0008168
Sebi166g00137 310 PIRSF O-mtase 14 88 IPR016461 GO:0008168
Sebi166g00137 310 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 307 IPR029063 -
Sebi166g00137 310 SUPERFAMILY "Winged helix" DNA-binding domain 26 87 IPR036390 -
Sebi166g00137 310 FunFam Caffeic acid 3-O-methyltransferase 13 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00137 Sebi-Chr166 1595460 1599777 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00137 19 310 Monolignol Biosynthesis Gene Families AT5G54160 46.348 1.95e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00137 K13066 - gmx:100803633 424.861