Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00135 ATGGCAAGCCTTCCTGATTCCGATTCGAAGAAGAAGGTCGTCGTGGAGTGTGAGTTTGACGACGAGAAACCAGAATCCGAATTGGAAGATGAAGAAAGCTTCTCGTATGCTGTGCAACTTGGCAACTCTATTGTGCTTCCCATGGCACTCCAATCCGCAACGGAGTTGGGCGTATTTGACGTCTTGCAGAAAGCAGGTAGAAGCGCTAAGCTCTCTTCCAAGGAGATTGCGTCTAAGCTTTCCTGCAACAATCCACAAGCAGCCGCAATGTTAGATCGCGTCCTCGCCCTTCTTGCATCCCACTCTGTGCTTCGCTGCTCTGTCCTCCCTGATGAACAAAACCTTGGATCCTTTCACAGACTCTACAGCATCACCCCTGTCGCCAGATTCTTCGCTCGCGATTCCGATGGTGTTTCATTAGGGCCTTTGATGGCCTTGCATCAAGATAAAATCTTCCTAGCTAGCTG 467 0.4989 MASLPDSDSKKKVVVECEFDDEKPESELEDEESFSYAVQLGNSIVLPMALQSATELGVFDVLQKAGRSAKLSSKEIASKLSCNNPQAAAMLDRVLALLASHSVLRCSVLPDEQNLGSFHRLYSITPVARFFARDSDGVSLGPLMALHQDKIFLAS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00135 155 PANTHER O-METHYLTRANSFERASE 40 149 IPR016461 GO:0008168
Sebi166g00135 155 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 155 IPR016461 GO:0008168
Sebi166g00135 155 SUPERFAMILY "Winged helix" DNA-binding domain 29 134 IPR036390 -
Sebi166g00135 155 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Sebi166g00135 155 Gene3D - 15 131 IPR036388 -
Sebi166g00135 155 FunFam Caffeic acid 3-O-methyltransferase 17 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00135 Sebi-Chr166 1577093 1577559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00135 27 155 Monolignol Biosynthesis Gene Families AT5G54160 41.538 2.30e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00135 K13066 - gmx:100803633 188.348