Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00134 ATGGCACCACCTTCATTAGAATCCAACACAAAACTTGCCAACGGGGAAGACAGGCATCTTAATGCAGGAATAGAAAAAGAAGAAGATGATGGCCTCATGTTTGGCATGCAAATGATGGGTTCTTTTGTGATTCCAATGGCTCTGCGGTCTGCCATTGACCTGGGTGTCTTTGACATCTTAGCCAAAGCAGGTGAAGGTGCCAAACTCTCTGCAAAGGATATTGCACTTCAGATTGGCACCAAAAACCCCGAAGCTCCCATAATGTTGGATCGTCTTCTTAGGATGTTGGCCAGTCACTCTCTGTTACATTGCTCTGTTCCTCAAGATCCACAAAGCCTTGCTACTTTGCCTCAGAGGTTTTACAGCCTCTCCCATGGGTCCAAATATTTTGTCACTGATGCTGATGGTGTCTCTTTAGGACCCACCATGGCCTTGGTTGTGGACAGAGTCTTCTACCAAAGCTGGAGCGAATTGAAAGGGGCGATCGTGGAAGGAGGCGTACCATTCAACAGGGTTTATGGCATGCATGCCTTTGAGTACCCGAGTTTTGAGGACGTCACAAAGCTAGTCGATGTTGGTGGAGGACTTGGGATCAATCTCAAATTGATCACATCCAAATACCCTCATCTCAAGGCTATTAATTTTGACTTGCCTCATGTTGTACAACACGCCCCCGTCTATGCAGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGCGTTCCCACAGGAGATGCTGTTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTAAAGCTTCTGAAGAATTGCTACAAGGCTGTTCCTGATGATGGGAAGGTGATTGTGGTGGACTCAATTCTGCCCATTGAGGCTGAGAATACAGCTATTGCCAAGAATGCTTTCGTATCTGATCTCTTAATGATGACTCAAAACCCAGGAGGGAAAGAGAGAACCCAGCAAGAATTCATGGAATTAGCAAAGGGATCTGGATATAGTGGAATCAGATTCGTGTGTTGTGTATCTGGCCTCTGGGTCATGGAGTTCTTCAAGTAG 1047 0.4575 MAPPSLESNTKLANGEDRHLNAGIEKEEDDGLMFGMQMMGSFVIPMALRSAIDLGVFDILAKAGEGAKLSAKDIALQIGTKNPEAPIMLDRLLRMLASHSLLHCSVPQDPQSLATLPQRFYSLSHGSKYFVTDADGVSLGPTMALVVDRVFYQSWSELKGAIVEGGVPFNRVYGMHAFEYPSFEDVTKLVDVGGGLGINLKLITSKYPHLKAINFDLPHVVQHAPVYAGVEHVGGDMFESVPTGDAVFMKWILHDWSDEHCLKLLKNCYKAVPDDGKVIVVDSILPIEAENTAIAKNAFVSDLLMMTQNPGGKERTQQEFMELAKGSGYSGIRFVCCVSGLWVMEFFK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00134 348 Pfam O-methyltransferase domain 183 330 IPR001077 GO:0008171
Sebi166g00134 348 SUPERFAMILY "Winged helix" DNA-binding domain 26 133 IPR036390 -
Sebi166g00134 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 346 IPR029063 -
Sebi166g00134 348 Gene3D Vaccinia Virus protein VP39 168 338 IPR029063 -
Sebi166g00134 348 PIRSF O-mtase 14 182 IPR016461 GO:0008168
Sebi166g00134 348 PIRSF O-mtase 179 348 IPR016461 GO:0008168
Sebi166g00134 348 FunFam Caffeic acid 3-O-methyltransferase 14 130 - -
Sebi166g00134 348 MobiDBLite consensus disorder prediction 1 23 - -
Sebi166g00134 348 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Sebi166g00134 348 Gene3D - 43 167 IPR036388 -
Sebi166g00134 348 PANTHER O-METHYLTRANSFERASE 38 328 IPR016461 GO:0008168
Sebi166g00134 348 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 348 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00134 Sebi-Chr166 1564280 1565839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00134 24 348 Monolignol Biosynthesis Gene Families AT5G54160 46.479 6.15e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00134 K13066 - gmx:100789402 468.003