Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00129 ATGCAGAGGCACGAGGAGGAACAGAGCAACCAAAATAACCGCAATGCCTCGGAGGAGGTGGTGGTTAGATGGGAGAGGTTTCTGCCTCGGATGGTGCTGAGAGTCTTGCTTGTCGAAGCTGATGATTCTACTCGCCAGATTATTGCTGCCCTTCTCCGTAAATGCAGTTACAGAGCCTTATTTTATGGCTCCGATGACCTCAACAAAATTGTGATCCTGGGAAATTTTAAGTCCATGTTTGGATTAACTTATTTTCTGGTGCATGGGAAACTAAGAAAAACACAGAAACAGAGAAACGCAGATACATGGAACACAACTGCCCCAAGCATCTGCAAGCAGCAGAGTGTTGCTGCAGTGCGTGATGGCTTAAAAGCATGGGAGACATTGAAGAACAAAGCATCTGACATAGATCTTATATTAACAGAAGTGGAGTTGCCATCAGTATCTGGATTTTCACTTCTTACCTTAATCATGGAGCATGACATTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCGTGATTCAGTTAGCATGGTGTTCAAATGCATGTCAAAAGGTGCAGCCGATTTTCTTATAAAACCTGTTCGGAGGAATGAGCTAAGGAATTTGTGGCAGCATGTATGGAGAAGACATGCGATCAGCAGGCCTCCTCAAGATTTAACATTTCCACAGAATAAACTTGATGTTGCTGCAGAAAACAATGCTACAAGTAATAATTCTACTCGTTCTGTGGCTTCCACGCAGAAAAGTAATGAATGCAACGAGAAAACTAGTGAGGCTCAAAGCACTTGTACATCGCCATTTTTGGAAGCTGAGAGTGCGTACATGGAAAATGTGCAGGACACGTCCCAGCTGAAGAGTTCTTCAAATTTGAGCAATATTGACACAGTAAAGCACGGAAAGTCTACCAAATTTGAAAGGAAATCAGCTGAGCATAATGATGAAGCGGAAGATAAACCAATTATATTTGTATCTGAAGCTGCAATGTACAACAAAACCTTAACAGGTTTAAGGCTAGGTCAAGGCTATGATTATAGTAGAACAGAAAACCAAGATGAAGTTGTAAGAGCAGAGTTAAGCAAAACCCATCATCACATTCATGGATGCAGTGATGAACCAGTGAAACCTTCTACTAGGGCTATTGACTTGATTGCTACATTTGAGAATCTTCCAAAGAGCGCTGAAGAAAATTGTAGTTTCAACATTGGTAATACAGCCAAGTTTGGTTTTGATACACAATTGGAACTCTCTTTAAAAAGAGATTCTCCTGGCAGCTCATGTAAACCTGCAACTGAGGAAAGGCAAATATTGAACCATTCAAATGCTTCTGCTTTTTCTCGGTATAGCAGTAGTAAGTTGTTGCAGCCCCTTTTTCCAGCACAGGATTCCAATGAGCAACATAAATTATCTGAAGATACAAATACTTCTCATCAGTATGATTGCAAAAATCAAAATCAGGAGAATATTACCACTCTAGCTATTGGTCAGTCTGGACAAGCTGAAGCAAAATTGCCAAACAGCCAGCTTGGATTCTTTCCTGGTATTGGAGTTACTTCTGATAATAAGTCTATGGGACACAGTAATCTTTTCCCTTCCATGCTTTCCACACAATCAGGTAAGCATCCCATATGGACCCCAAAACCAGTGTGCCACAAAGAGAGTTCCCCATTTCCTACAAGTACTTCTTCCCAGTCCAATACTGAAAGTCACAACTCAGAACATCATCACTGGTCAGATGATGCCACCTACACTTCTGATCAACATGTAGTTGATCAAAGAAATTTGGATTGTGCGATACATGATTCTCCTGCTACTGGTCAAAATCCTGGTAGTAGTTTTTACCATGATGCAGCAAATCATAATAGCAGTGGTGTATATGGAAGCGTAGGCAGCGGAAATGATGGAAATGCTCCTTCAGCTGTTGAATCCCAGAACAACCTTGACAGTTTTATGGATAGTGGACACCACATTTGTGATGGATTCAAAGGGACAGATTCTCATGGCACCAGCCAAAGACAAGCAGCTCTAACAAAGTTTCGACTTAAACGAAAAGACAGATGCTATGAGAAAAAGTTAGTTTGGAAACTCCTATTGCATGTTTTCACTAAAGATGTCACCATGGTCCGATATGAAAGCCGAAAAAGACTGGCAGAGCAGCGCCCTCGGGTGAAAGGGCAATTTGTTCGCCAAGTGCACAATGAACAAGCAGTAGCAGATGCCGGTGGTGGTTCCTAA 2238 0.4155 MQRHEEEQSNQNNRNASEEVVVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRALFYGSDDLNKIVILGNFKSMFGLTYFLVHGKLRKTQKQRNADTWNTTAPSICKQQSVAAVRDGLKAWETLKNKASDIDLILTEVELPSVSGFSLLTLIMEHDICKNIPVIMMSSRDSVSMVFKCMSKGAADFLIKPVRRNELRNLWQHVWRRHAISRPPQDLTFPQNKLDVAAENNATSNNSTRSVASTQKSNECNEKTSEAQSTCTSPFLEAESAYMENVQDTSQLKSSSNLSNIDTVKHGKSTKFERKSAEHNDEAEDKPIIFVSEAAMYNKTLTGLRLGQGYDYSRTENQDEVVRAELSKTHHHIHGCSDEPVKPSTRAIDLIATFENLPKSAEENCSFNIGNTAKFGFDTQLELSLKRDSPGSSCKPATEERQILNHSNASAFSRYSSSKLLQPLFPAQDSNEQHKLSEDTNTSHQYDCKNQNQENITTLAIGQSGQAEAKLPNSQLGFFPGIGVTSDNKSMGHSNLFPSMLSTQSGKHPIWTPKPVCHKESSPFPTSTSSQSNTESHNSEHHHWSDDATYTSDQHVVDQRNLDCAIHDSPATGQNPGSSFYHDAANHNSSGVYGSVGSGNDGNAPSAVESQNNLDSFMDSGHHICDGFKGTDSHGTSQRQAALTKFRLKRKDRCYEKKLVWKLLLHVFTKDVTMVRYESRKRLAEQRPRVKGQFVRQVHNEQAVADAGGGS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00129 745 ProSiteProfiles Response regulatory domain profile. 34 209 IPR001789 GO:0000160
Sebi166g00129 745 Pfam CCT motif 673 731 IPR010402 GO:0005515
Sebi166g00129 745 MobiDBLite consensus disorder prediction 281 299 - -
Sebi166g00129 745 SMART REC_2 100 205 IPR001789 GO:0000160
Sebi166g00129 745 MobiDBLite consensus disorder prediction 605 649 - -
Sebi166g00129 745 SUPERFAMILY CheY-like 116 219 IPR011006 -
Sebi166g00129 745 Pfam Response regulator receiver domain 113 203 IPR001789 GO:0000160
Sebi166g00129 745 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 417 IPR045279 GO:0009736
Sebi166g00129 745 Gene3D - 111 364 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 555 569 - -
Sebi166g00129 745 ProSiteProfiles CCT domain profile. 689 731 IPR010402 GO:0005515
Sebi166g00129 745 MobiDBLite consensus disorder prediction 600 649 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 281 315 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 529 580 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 233 265 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 529 543 - -
Sebi166g00129 745 MobiDBLite consensus disorder prediction 300 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00129 Sebi-Chr166 1537107 1541571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00129 672 737 Response Regulator Gene Family AT5G24470 65.152 5.46e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Sebi166g00129 Response_reg 1.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00129 K12130 - gmx:100779346 818.92