Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00107 ATGGCAATCAAGGTGGGTCAAGGCGAAGAGCAACAGAGGATCACGGTACCCGTTAATTACCTCAACCACCCCCTGTTTATTCAGCTCCTCAAGGAGGCAGAGGAAGAGTATGGTTTTTCTCACCAGGGAACCATAGTTATCCCTTGTCAAGTCGCCGAGTTCAAGAACGTTCAACACTTGATTGATACTGATCAGATGTCCCACCACCATCTAGTTGGCTGCTTCAGGGCTTGA 234 0.4872 MAIKVGQGEEQQRITVPVNYLNHPLFIQLLKEAEEEYGFSHQGTIVIPCQVAEFKNVQHLIDTDQMSHHHLVGCFRA 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00107 77 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 56 IPR003676 GO:0009733
Sebi166g00107 77 Pfam Auxin responsive protein 5 60 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00107 Sebi-Chr166 1269618 1269851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00107 8 55 Calmodulin-binding Proteins AT3G43120 54.167 2.60e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00107 K14488 - gmx:100500512 126.331