Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00099 ATGGATTCTGGTGCTGTATTGGCATTGCCTGTGAACAATGAATTCAAAACAAGGGAACCTCCAGATTTTGAGGACGACTTTGTAGAGAAAGATCCTACCGGCCGGGGCTTTGATGAAGTTAATGGAATAGAAGTTGCTTGGAACCAAGTCAAGATTGATGAAATCTTGCAGTCAGCAGATGATCTTGCAAAATTGTATTCCGAAGTTCATCTATTGAAGTCTCTGAAACATGAAAATATCATAAAGTTCTTTAATTCCTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGTTATTCACATCTGGAAATTTAAGGCAGTACCGTCAGAAGCATAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTAGACAGATTCTTCAAGGCTTAGTATATCTTCACAGTCACAAGCCACCTATTATACACAGAGACTTGAAATGCGACAACATCTTCGTCAATGGAAACCATGGAGAAGTTAAGATAGGAGACCTTGGTTTGGCAATTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTGTATGAAGAGGAATACAATGAACTTGTTGATGTCTATTCGTTTGGGATGTGCATGTTGGAGATGGTTACTTTTGAGTACCCGTACAGTGAATGCAGAAATCCAGCCCAAATCTATAAGAAAGTTACCTCTGGCATTGAACCTGCATCCCTTAAAAGGGTGAGTGATCCCCAAATAAAGGGGTTTATCAAAAAATGTCTTGTTCCAGCATCCAAGAGATTGTCTGCAGAGGAGCTTCTTAAAGACCCATTTCTGCAAGTTGAGAGTCCAAAGGATCCAATCCTTGATCCCTTACAGTTACCTAGAAAAACTCTAAAAGCTTTAGATCTGTCCAAATCTGGTCATCTATCTATGGACCTAGATGCTGACTACAAACAGATCCCTATGAGTATCAGTACTGAGAACAGCCAGGGAAGTCCACATTGTCCAGTTCTTGAAGTTCAGAGGACATATAAAAACAATGAGTTTAGGTTGAAAGGGACCAAAAATGATGATAACTCAGTATCATTAATCTTGCGTATTGCTGATTTAAATGGTCAAGTAAGGAATATACATTTTCTCTTTTACATTGACACGGATACTGCAGTCTCTGTTGCCTCAGAGATGGTTGAAAATTTGGAGCTGGCAGATCATGATGTAGCCTTCATAGCTGAGCTCATTGATTACCTAATAATGAAACTTCTACCTGGGTGGAAGCCTTCATCTGATTATTCCTCAAGTGGAGGATTAAGTCTGTGCGATGGCTCTCCAACACTTAGAGATGACCAAACCTTAATGCCATGCCCATGTGGTTCTGTGGTCAGTAGTGTTCCCTCTGAATTGGTTTTTGATCAAGATAGCATTTCTGGGTTTAAAACTACTCAAAGACAAGGTTTTGCGACAGCTGAAGTGAGCTGCATGTTTAACATTGCTGATAATGCTACTTTTGAGAGTGAGCATAATTCGTCTCCTAGTTTGGCTAGCTTGGAAGATCAATATTCACAAGAATCTGAGATAGTTATTGAAGATGCTTGCATGAAAAATGACAACTGTCTTGATTCTGATGTTGATGGGAGTTATAAAGGATTGAGTTGGTCCACCTCCGAACTGGAGCTCGGGGATACATATTTTGAAGGCTGTAAATTGCAGACTACAAATTGCAGTGCTGAAGAAGGGATCATGATAAATGAATTCTCAAAGAACTCTCACACTCCAACCCCAGCTTTTTGTGAAACATCTAATGTTCTGAGCTTGAATAGCAGTTATTCTTCTCTGTCTTTAGCCGACAAAGACATTGACCTTGAACTAAAGCTTGAGCTTGATGCAATCGAGTCTAAGTATCAGCATTGGTTTCAAGAACTTTCTAGAATGAAGTCCGAGACATTGGAAGCCACCAGAAGGAAATGGATTGCCAAGAAGAAACTTGCTGTTCATTAA 1989 0.3982 MDSGAVLALPVNNEFKTREPPDFEDDFVEKDPTGRGFDEVNGIEVAWNQVKIDEILQSADDLAKLYSEVHLLKSLKHENIIKFFNSWIDDKKKTVNIITELFTSGNLRQYRQKHRYVDMKAIKGWARQILQGLVYLHSHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECRNPAQIYKKVTSGIEPASLKRVSDPQIKGFIKKCLVPASKRLSAEELLKDPFLQVESPKDPILDPLQLPRKTLKALDLSKSGHLSMDLDADYKQIPMSISTENSQGSPHCPVLEVQRTYKNNEFRLKGTKNDDNSVSLILRIADLNGQVRNIHFLFYIDTDTAVSVASEMVENLELADHDVAFIAELIDYLIMKLLPGWKPSSDYSSSGGLSLCDGSPTLRDDQTLMPCPCGSVVSSVPSELVFDQDSISGFKTTQRQGFATAEVSCMFNIADNATFESEHNSSPSLASLEDQYSQESEIVIEDACMKNDNCLDSDVDGSYKGLSWSTSELELGDTYFEGCKLQTTNCSAEEGIMINEFSKNSHTPTPAFCETSNVLSLNSSYSSLSLADKDIDLELKLELDAIESKYQHWFQELSRMKSETLEATRRKWIAKKKLAVH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00099 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Sebi166g00099 662 Gene3D Transferase(Phosphotransferase) domain 1 102 281 - -
Sebi166g00099 662 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 359 415 IPR024678 GO:0004674|GO:0005524
Sebi166g00099 662 SUPERFAMILY Protein kinase-like (PK-like) 35 329 IPR011009 -
Sebi166g00099 662 FunFam Probable serine/threonine-protein kinase WNK1 24 100 - -
Sebi166g00099 662 FunFam probable serine/threonine-protein kinase WNK9 102 281 - -
Sebi166g00099 662 Gene3D Phosphorylase Kinase; domain 1 27 100 - -
Sebi166g00099 662 ProSiteProfiles Protein kinase domain profile. 1 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi166g00099 662 Gene3D - 357 426 - -
Sebi166g00099 662 SMART serkin_6 27 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi166g00099 662 Pfam Protein kinase domain 41 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi166g00099 662 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 35 645 - -
Sebi166g00099 662 CDD STKc_WNK 35 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00099 Sebi-Chr166 1170804 1174083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00099 601 662 MAP Kinase Kinase Kinase AT5G41990 41.935 5.35e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi166g00099 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00099 K08867 - qsa:O6P43_027404 876.7