Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi166g00096 | ATGGAAGGGGTAGGTCCAAATTCATGCACAGATAGCAGCAGGGGTGCAGTGTCAGAGAAGAAGACAAGACCACAAGAGCAGCAATTGAATTGTCCAAGGTGCAATTCAACCAACACAAAATTCTGTTATTACAACAACTACAGCCTCACACAACCAAGATACTTTTGCAAGACATGCAGAAGGTATTGGACAGAAGGAGGCTCTCTCAGAAATGTCCCTGTTGGAGGTGGTTCAAGGAAGAACAAGAAGCAGCATCATCTCCTCTCCTCCTCAAAGCTTCCTGACTTAAATCCACCAACAATTCCTAATTCCCAAAACCCTAAAATGCAAGATCTTAATTTGGCTTTCCCAACTATGGACAAGTATCATCAACACCATGCCATGTCTCCATATGTTGAAATTGTAGGTGATTCCACCACCACTCACCATACCTCAGCAATTGATCTGCTAAGGTCTGCAGGCATGCCTAATTATGTTGCTTCTCCTAATTCCATGATGTCAAGCTCCACCAATGCACTTTACCCTTCAGCAGCAGCAGGGTTTCCCATGCAGGAAATGAAACCAAACCTAATTGGCTTTTCAGTTGAAAACAGATCATATGGGGTCCAAGTCCAACAGAATGGTGGGAGTGGAAGACTTTTGTTCCCTTTTGGAGACATGAAGCAACTTTCTACAACTACTGTCCAAGTGGAACCCATTAAAGAACAACCAAATTCAACTGGATATTGGACTGGAATCATTGGTGAGGGCTCATCATGGTAA | 762 | 0.4344 | MEGVGPNSCTDSSRGAVSEKKTRPQEQQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKQHHLLSSSKLPDLNPPTIPNSQNPKMQDLNLAFPTMDKYHQHHAMSPYVEIVGDSTTTHHTSAIDLLRSAGMPNYVASPNSMMSSSTNALYPSAAAGFPMQEMKPNLIGFSVENRSYGVQVQQNGGSGRLLFPFGDMKQLSTTTVQVEPIKEQPNSTGYWTGIIGEGSSW | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi166g00096 | 253 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Sebi166g00096 | 253 | ProSitePatterns | Zinc finger Dof-type signature. | 31 | 67 | IPR003851 | GO:0003677|GO:0006355 | |
Sebi166g00096 | 253 | MobiDBLite | consensus disorder prediction | 90 | 107 | - | - | |
Sebi166g00096 | 253 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 19 | 168 | IPR045174 | GO:0003700|GO:0006355 | |
Sebi166g00096 | 253 | MobiDBLite | consensus disorder prediction | 70 | 107 | - | - | |
Sebi166g00096 | 253 | ProSiteProfiles | Zinc finger Dof-type profile. | 29 | 83 | IPR003851 | GO:0003677|GO:0006355 | |
Sebi166g00096 | 253 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Sebi166g00096 | 253 | Pfam | Dof domain, zinc finger | 27 | 83 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi166g00096 | Sebi-Chr166 | 1151274 | 1152035 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi166g00096 | 15 | 253 | C2C2-Dof Transcription Factor Family | AT3G61850 | 47.273 | 9.31e-61 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Sebi166g00096 | zf-Dof | 3.2e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi166g00096 | - | - | gmx:778110 | 286.574 |