Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00073 ATGGAACCTGCTTCTGGAATCCTTAAGATTCCTCCTGATTCCTTTTTGAAGTTGCATTCTACAGTGAAGAATGGGACTCAAATAACAAAGACACTGATATATTGTGCAGTTCACAGGGTCCCAAATCCAGATTCAGTACTGGTTGTGCATACACCCCAAGGGACATTCTCTCCAAGAACCTCGCTTCAAAGTCACAAGGGATGCTTTAGAGGATCAAGGACGGCTTCGTCACAGAATATAGAACTACTTGAATCTTCAACCTCTGAAAGTTATGAGGTTGAGCCGCTATCTGCAGCCAGGTGTCGTGTGTACAAAAGGTCTCTCAATAAGAAAGATGATGGACCAATACTTTACTTGCTTGGGGGGCCAAACATTCATTCTTTAGGTGCAATAACTCAATTGAACAGCAACAAGGATGCTGAAATATTTTCTTCTTTCAAGGAACGTCTTCGCCATTTACAAAAAACGGAAAATCATAGAGTTTGCTTTGGAAAGTCAGGTATTCATGGATGGGGCCTCTTTGCACGTAGAGATTTGCAAGAAGGAGAAATGGTTAATGAGTATCGTGGTGAGCAGGTAAGGCGTAGTGTTGCTGATATGAGGGAAGCGAAATACCGTTCAGAAGGCAAAGATTGTTATCTGTTCAAGATTAGTGAAGAAGTGGTAATTGATGCAACGGATAAGGGCAATATGGCACGTTTAATAAACCATTCTTGCATGCCAAACTGCTATGCAAGGATTATGAGTTTAGGTGATCAGGAGAGCCGGATTGTTCTTATTGCCAAGACCAATGTCTCTGCTGGTGAAGAACTAACGTATGATTACTTGTTCGATCCAGATGAGCGGGATGAACTCAAGGTTCCCTGCCACTGCAAAGCTCCCAGTTGTAGGAAATTTATGAATTAG 906 0.4216 MEPASGILKIPPDSFLKLHSTVKNGTQITKTLIYCAVHRVPNPDSVLVVHTPQGTFSPRTSLQSHKGCFRGSRTASSQNIELLESSTSESYEVEPLSAARCRVYKRSLNKKDDGPILYLLGGPNIHSLGAITQLNSNKDAEIFSSFKERLRHLQKTENHRVCFGKSGIHGWGLFARRDLQEGEMVNEYRGEQVRRSVADMREAKYRSEGKDCYLFKISEEVVIDATDKGNMARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCHCKAPSCRKFMN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00073 301 ProSiteProfiles Post-SET domain profile. 285 301 IPR003616 -
Sebi166g00073 301 SMART PostSET_3 285 301 IPR003616 -
Sebi166g00073 301 Gene3D SET domain 73 301 IPR046341 -
Sebi166g00073 301 Pfam SET domain 170 275 IPR001214 GO:0005515
Sebi166g00073 301 SMART set_7 159 282 IPR001214 GO:0005515
Sebi166g00073 301 ProSiteProfiles SET domain profile. 159 276 IPR001214 GO:0005515
Sebi166g00073 301 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 160 301 IPR044570 GO:0042800|GO:0051568
Sebi166g00073 301 FunFam Histone-lysine N-methyltransferase 133 301 - -
Sebi166g00073 301 SUPERFAMILY SET domain 151 298 IPR046341 -
Sebi166g00073 301 CDD SET_SETD1-like 148 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00073 Sebi-Chr166 865724 869041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00073 170 301 C2H2 Transcription Factor Family AT2G23740 35.570 5.42e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi166g00073 SET 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00073 - - gmx:100793624 478.789