Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00070 ATGAATGCAAAGGGACATAAGTTTGTGAGGTTTGAGGACTTCAAATCCGAGTCATCTTTTAGTATAGAGCAGGAAGATTCTGTAAACAATGGATATCACACAAGAAAATTTAGACCAAGTGTAAATGCTATTTTGAAGAGTATCGGAAGAAGACTAGAGAGTGGGTCAGAGAAGATAAAGAACTTGAGAAGACCTTCAGCTGTCCACCCTGTAAGCAATGGACAAACAAAAAAGCCGGCTTCTAGGCGCAAAATTCATGATCCACAGGGGCCAATGCTTCAGAGATGGAACAAAATCTTTGTAATCACTTGTGTGATGGCAGTCTCTGTGGACCCACTGTTCTTTTACATTCCAGTGATCCATGGGAAAGAGAAATGCCTTGATTTGAATGGAACATTGCAGATTACTACTAGTGTTCTTCGCACTTTCTTTGATCTTTTCTACATTCTCCGCATAATATTTCAGTTTCAAACAGGGTTTATTGCCCCTTCTTCTCGTGTTTTTGGAAGGGGTGATCTGATTGATGATCCAGTGGCAATAGTGAAAAGATACTTAAGCTCTCACTTCATCATTGACATTCTATCAATTCTTCCACTCCCACAGGTGGTTGTTTTAGCTATAATTCCAAACATCAAAGATTCAGTTCCATTTGTAGCAAAGGATTTGTTGAAATATATAGTACTAATCCAGTATGTGCCAAGGCTGCTGCGGATCTATCCACTATTCAAAGAAGTAACTAGAACTTCTGGCATATTGACAGAGACAGCATGGGCTGGGGCTGTTTATAATCTTTTTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTAACTGGTATCTGCTTTCAATAGAATCAGAGGTGCGGTGCTGGCGCCGAGAGTTGAATAACGCTTCGCTCTTTCATGAATCTTACTTGGGCTGTGGTGGAGCCCGGGATCGAGCTGTCTTTTCACGTCTCAATAGCACTTGCTCTTTCGTTGACCCTGATCAAATCAAGGATGCAAACACCTTCAATTTTGGAATATTTTTCGACGCTCTAGATTCAGGTGTGGTAGATTCAACTACTGATTTTCCTCAGAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCACTTGGACAAAACCTCAAGACAAGTACTTATATTGTGGAGATAGCCTTTGCAATCTTCATTGCCATCTTTGGATTGGTTTTATTCTCATTACTTATTGGAAACATGCAGAAATACCTGGAATCTACAACTGTTAGGGTGGAAGAGATGAGAGTGAAGAGGCGGGATGCTGAACGGTGGATGTCCCACCGTATGCTACCTGAGAACTTGAAGAAAAGAATTAGAAGGTATGAACAGTACAAATGGCAAGAAAATAGGGGTGTTGAGGAAGAGGCATTAATTCGTAACCTCCCTAAAGATCTCAGAAGGGACATAAAGCGCCATCTTTGCTTTACTTTAGTTAAAAAGGAGCTTCTAACATGGGCTTTGGATCCCAACTCCTCCTCAAATCTACCCGTTTCAACTAGAACAGTAGAAACTATATCAGAAGTTGAAGCCTTTGCTCTTATGGCTGATGACTTGAAGTTTGTTGCTTCCCAATTTCGACGTCTCATTAACAGCAAACAGCTCCAGCAGACTTTCAGGTTCTATTCCCCACAATGGAAGACATGGGCTGCCTGCTTCATACAAGCAGCTTGGCGTCGATACTGGAAAAGGAAGAATGATAGGTCATTTCTTGAAGCAGAAGACAAGCTACAAGATGTTCTTGCAAATGAGGATGGCTCCACCCTAAGCCTTGGTGCAACCATATATGCATCAAGGTTTGCTGCCAATGCATTACGAGCCTTGAGAGAAAATAACAGACACAACAGAATGCCGCAGAGACTACTACCTCTGTTACCTCCAAAGCCAGCTGAGCCAGATTTCACTGCTCAGAAAAACTAG 1944 0.4172 MNAKGHKFVRFEDFKSESSFSIEQEDSVNNGYHTRKFRPSVNAILKSIGRRLESGSEKIKNLRRPSAVHPVSNGQTKKPASRRKIHDPQGPMLQRWNKIFVITCVMAVSVDPLFFYIPVIHGKEKCLDLNGTLQITTSVLRTFFDLFYILRIIFQFQTGFIAPSSRVFGRGDLIDDPVAIVKRYLSSHFIIDILSILPLPQVVVLAIIPNIKDSVPFVAKDLLKYIVLIQYVPRLLRIYPLFKEVTRTSGILTETAWAGAVYNLFLYMLASHVVGANWYLLSIESEVRCWRRELNNASLFHESYLGCGGARDRAVFSRLNSTCSFVDPDQIKDANTFNFGIFFDALDSGVVDSTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTYIVEIAFAIFIAIFGLVLFSLLIGNMQKYLESTTVRVEEMRVKRRDAERWMSHRMLPENLKKRIRRYEQYKWQENRGVEEEALIRNLPKDLRRDIKRHLCFTLVKKELLTWALDPNSSSNLPVSTRTVETISEVEAFALMADDLKFVASQFRRLINSKQLQQTFRFYSPQWKTWAACFIQAAWRRYWKRKNDRSFLEAEDKLQDVLANEDGSTLSLGATIYASRFAANALRALRENNRHNRMPQRLLPLLPPKPAEPDFTAQKN 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00070 647 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 59 489 - -
Sebi166g00070 647 SUPERFAMILY Voltage-gated potassium channels 87 414 - -
Sebi166g00070 647 Gene3D Jelly Rolls 484 536 IPR014710 -
Sebi166g00070 647 Gene3D - 98 415 - -
Sebi166g00070 647 Gene3D Helix hairpin bin 419 483 - -
Sebi166g00070 647 FunFam Cyclic nucleotide-gated ion channel 1 419 483 - -
Sebi166g00070 647 Pfam Ion transport protein 95 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi166g00070 647 ProSiteProfiles IQ motif profile. 555 584 IPR000048 GO:0005515
Sebi166g00070 647 MobiDBLite consensus disorder prediction 624 647 - -
Sebi166g00070 647 MobiDBLite consensus disorder prediction 63 87 - -
Sebi166g00070 647 SUPERFAMILY cAMP-binding domain-like 421 499 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00070 Sebi-Chr166 847432 850952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00070 1 644 Ion Channels AT5G53130 53.508 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00070 K05391 - gmx:100797784 801.971