LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi166g00033	ATGGACAAATCTCACATGCCTCAATTTTTCACCTCCCAACACCATTGGTATTCATCCACCATTAGTTCCCTCAAAACAATACACCCCACCTCTTCAGATGAAAATGACAACCCCTCCATTATGTACTCTTATGACAATGCACTTCATGGTTTCAGTGTTGCCTTGTTACCAGAAGAGTTAGAGATTTTAAAGCAAACCCCAGGTTTCATCTCAGCATATAGTGACAGAGCAGCCATGCTTGACACCACCCAGACTTATGGTTTCCTCTCTCTCAACCATTCCCATGGCCTTTGGCCTGCTTCCAGTTATGGTGAAAATGTCATTGTTGGCATCATCGATTCTGGAATTTGGCCAGAGAGTGATAGCTTCAAGGACAATGGCATGATGAATGCTTCAAAAATTCCTTCACGGTGGAAGGGAACATGTGAGGGTGGACAAGAATTTGATCCTTCCCTATGTAACTCCAAACTCATAGGAGCAAGACACTTCAATAAGGGTGTTTTTGCTGCTCAAGGTAATAACACTAAAATTGGCATGAACTCTGTTAGAGACACAACGGGACATGGAACTCACACTTCCTCTACAGTTGCTGGAAACTATGTAAAGGGTGCATCTTTTTTTGGTTATGCTAAAGGCACAGCCAGAGGAATTGCACCACGTGCAAGGATAGCTATGTACAAGGTTGCATGGCCTGAAGGTATATACGCCTCTGATGTTCTTGCAGGTATGGATCAAGCAATTGCTGATGGGGTGGATGTGATTTCTATCTCAATGGGGTTTGATAGGGTGCCTTTGTATGAGGACCCTGTAGCTATAGCTGCTTTTTCTGCTATGGAGAAAGGTGTGGTAGTTTCAACCTCAGCAGGAAACTCAGGTCCAGCATTAGGGTCCTTACACAATGGGATTCCATGGGTTTTAACAGTTGGAGCAAGCAACACAGAGCGTTCTTTTGGAGGTACTTTAACTCTTGGAAACGGGAAGAGCTATGTGGGGTGGACATTGTTCCCAGCAAGTGCCACAGTAAATGAGCTTGCTCTAGTTTACCATAAGAACATTTCAGCATGTGATTCTCCTAAACTATTATCACAAGTAGCAGGTGGCAGCATTGTTATATGTGATCCTGTTATGGATGTTAAGGAGCAGATTGAACATGTGTCAGAGTCTGAAGTGTATGGAGCTATATTTATCTCCAGTGATCCTAAAGTCTTTGAAATGGGAAGAAGAATGACATGCCCTGGTGTTGTGATTAGTACTAAAGATGGAGAAGGTGTAGTACAATATGCACAAAGGACAAGACACCCTTCAGCTACCATTAAGTTTCAACAAACCATTGTAGGAAAAAAACATGCTCCCACAGTGGCTACTTACAGTTCAAGAGGGCCTTCTTGGGGTTGTCCATCAATATTGAAGCCAGATGTGATGGCACCTGGATCATCAATTCTTGCAGCTTGGATTCCAGATTCACCTGTTGCACAAATTGGCTCAAATGTGTTCTTGAGTAATGAACACAGTTTGTTGACAGGGACTTCCATGGCTTGTCCTCATGCTTCTGGGGTAGTGGCTCTTTTGAAAAATGCACATCCAGAATGGAGTGCTTCTGCTATTAGATCTGCACTCACAACCACAGCCAACTCATTGGATAATACTGGAAAGCCTGTTGAAGAGAATGGTGAGTTTCCTCAACCAGCTTCTCCTCTTGCAATGGGAGCTGGTCAAATTGATCCTAATCGAGCTCTTGATCCAGCTTTCTATGTTAATGAGAGTGTGGCAGTGGAGAGAAAATTCCGGAGAACAGTGACAAACGTTGGAGATGGTCCAGCTGTTTACACTGCCAGGGTGAGCTCTTCAAATGGCACCACAATCACCGTGTCTCCCAATAAGCTGGTTTTCAAGAGAAAATATGAGAAACGAAGCTTCACTTTGACATTGAAGTCTCAAATGGACAAGAAACATGTTGTGGCTTATGGTGCACTCGAATGGGTTCAAGAAAGAGAAAGGCGTATTGCGTCTGGGATATCAGACAATTTACATGCAGTAAAGGGATCATTTGCCTGCCCTGTTTTAGTTGTAACAGGAGTCAATCATGTTTGA	2091	0.4342	MDKSHMPQFFTSQHHWYSSTISSLKTIHPTSSDENDNPSIMYSYDNALHGFSVALLPEELEILKQTPGFISAYSDRAAMLDTTQTYGFLSLNHSHGLWPASSYGENVIVGIIDSGIWPESDSFKDNGMMNASKIPSRWKGTCEGGQEFDPSLCNSKLIGARHFNKGVFAAQGNNTKIGMNSVRDTTGHGTHTSSTVAGNYVKGASFFGYAKGTARGIAPRARIAMYKVAWPEGIYASDVLAGMDQAIADGVDVISISMGFDRVPLYEDPVAIAAFSAMEKGVVVSTSAGNSGPALGSLHNGIPWVLTVGASNTERSFGGTLTLGNGKSYVGWTLFPASATVNELALVYHKNISACDSPKLLSQVAGGSIVICDPVMDVKEQIEHVSESEVYGAIFISSDPKVFEMGRRMTCPGVVISTKDGEGVVQYAQRTRHPSATIKFQQTIVGKKHAPTVATYSSRGPSWGCPSILKPDVMAPGSSILAAWIPDSPVAQIGSNVFLSNEHSLLTGTSMACPHASGVVALLKNAHPEWSASAIRSALTTTANSLDNTGKPVEENGEFPQPASPLAMGAGQIDPNRALDPAFYVNESVAVERKFRRTVTNVGDGPAVYTARVSSSNGTTITVSPNKLVFKRKYEKRSFTLTLKSQMDKKHVVAYGALEWVQERERRIASGISDNLHAVKGSFACPVLVVTGVNHV	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi166g00033	696	FunFam	Subtilisin-like protease SBT1.5	106	323	-	-
	Sebi166g00033	696	PRINTS	Subtilisin serine protease family (S8) signature	104	123	IPR015500	-
	Sebi166g00033	696	PRINTS	Subtilisin serine protease family (S8) signature	507	523	IPR015500	-
	Sebi166g00033	696	PRINTS	Subtilisin serine protease family (S8) signature	184	197	IPR015500	-
	Sebi166g00033	696	Gene3D	Peptidase S8/S53 domain	106	587	IPR036852	GO:0004252\|GO:0006508
	Sebi166g00033	696	ProSiteProfiles	Serine proteases, subtilase domain profile.	85	579	-	-
	Sebi166g00033	696	CDD	PA_subtilisin_like	320	438	-	-
	Sebi166g00033	696	ProSitePatterns	Serine proteases, subtilase family, serine active site.	508	518	IPR023828	-
	Sebi166g00033	696	CDD	Peptidases_S8_3	80	544	IPR034197	-
	Sebi166g00033	696	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	80	IPR037045	-
	Sebi166g00033	696	Pfam	Subtilase family	104	548	IPR000209	GO:0006508\|GO:0008236
	Sebi166g00033	696	Pfam	Peptidase inhibitor I9	6	76	IPR010259	-
	Sebi166g00033	696	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	582	IPR045051	-
	Sebi166g00033	696	Gene3D	-	314	445	-	-
	Sebi166g00033	696	Pfam	Fibronectin type-III domain	581	672	IPR041469	-
	Sebi166g00033	696	SUPERFAMILY	Subtilisin-like	83	582	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi166g00033	Sebi-Chr166	421939	424457	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi166g00033	1	665	Subtilisin-like Serine Gene Family	AT5G67090	39.095	3.57e-163	486

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi166g00033	-		-	ccaj:109796640	998.808