Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00030 ATGGGTCGGCACCTTTTGTTTGCATTCTTCATTATTGCAATATTCATAGACTCCACCTCACAAGTATCCCCTGCACCCAATGGCCCTGAAGGTAACTGTGTGTTGAATTCCAACAACACATACCCATATGTGTCATTTGGTGAGTGTGGGGATGTGAAAGAGGACATTAGCAAGTGGGGTGGGGATGGTTTCCCTACCACTCTGTGCTGTCGTAATGCTCTGACTGTTCTGTCATACGCCCTGGCCTTGCAAGTCCGTAACTCAACGGGACAAGTCTTTATTTCCCAAGATCAATGGCAGAGTTGTAGCCAGTTATTTCATCAGCAACATGGGATGTCACCATCTTCATGTGGCTTTGACACCTTGTACTATGGGAGCTCCAAATGTTCAAACTTTGTTTTGCAGGATGTTCGTGGCATACAGGAGTACCAAGATGCATTGAACAAGTGTGAACATTTTGATCGTCCATTTTATCAGTCATGTGCAGATTGTACCAGTGCAATATTGAGTGTGAGAGATAGTTTATATGATCAGATGGGAGACAACAATAATGCAACTGAGAGAGCCATATGTGGAGTAGCAACTCTTGTTGCTGTTGCAGCTGACAAATCTGATGACCCTTCCCTCATTGACAAATTCTTGCGCTGCTTGCCAACCCCAGCAACAGGAAGAAACATGATATTGCTTCTTGTTTTTCTGGTGAAATGTGTGTCCAAGAAGAAGCCTCGTAAGCGAGCTCACTTGAAAGAGATCACTACCTGGTCTGGACTAAGGTTCTCAAAATCTGAAATTGAGAAGGCATTGAATTATGGCAATGAAAAGATAAGCCTTGGACGTGGGAGTGCAGGCCAAGTGTACAAAGGTGTTCTCCCTAGTGGTCAAGTTGTGGCAATCAAGCATTTGACAAAGAGTAAGAATTCTGATTCTTTCACTAGAGAAGTTGAAGGTCTTTCAAGGCTTCGTCACCCAAACCTGGTTTGTCTATTCGGCTGTTGCATGGAAGATGGAAAAGACAGCCGTTTGACATGGGAAACAAGAGTCCAAATTTTGAGAGATTGTTCATTTGCGCTCAAGTATCTGCACCATCATATAGGAGGTTGTGTTGTCCATAGAGATATTAAGCTCACCAACATCCTTTTGACTGAGAATTACGAAGCCAAACTGTCAGATTTTGGACTGGCAAAGATGATGGGGATGGAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGGTACATGGATCCAGAGTACATGAGTAATGCCAAGCTAACATGTGCCAGTGATATATACAGTTTTGGTATTGTTGCTTTACAAATTCTGTCAGGACAAAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTAAGTATGGGAAAACGTCCACTGTTGGATTTTGAAGACCCGCGGCTAAATGGACAAGTTGATAAGGCTGATTTTGAAGCCATCTTACAGATTGCAGTGCTTTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACTATTGAGGTTGTTTTTGATGAACTGGACAAGGTCTACAGGGATATGAAATCAAGGGAGAAGGCAAAACAAGATTCGTGCTTATCAACAACATCCACCTCGAGCTCCAAGTCTCCAAAGACTCCTTCCCCCTCCTCTTTGACATAA 1671 0.4327 MGRHLLFAFFIIAIFIDSTSQVSPAPNGPEGNCVLNSNNTYPYVSFGECGDVKEDISKWGGDGFPTTLCCRNALTVLSYALALQVRNSTGQVFISQDQWQSCSQLFHQQHGMSPSSCGFDTLYYGSSKCSNFVLQDVRGIQEYQDALNKCEHFDRPFYQSCADCTSAILSVRDSLYDQMGDNNNATERAICGVATLVAVAADKSDDPSLIDKFLRCLPTPATGRNMILLLVFLVKCVSKKKPRKRAHLKEITTWSGLRFSKSEIEKALNYGNEKISLGRGSAGQVYKGVLPSGQVVAIKHLTKSKNSDSFTREVEGLSRLRHPNLVCLFGCCMEDGKDSRLTWETRVQILRDCSFALKYLHHHIGGCVVHRDIKLTNILLTENYEAKLSDFGLAKMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLLDFEDPRLNGQVDKADFEAILQIAVLCVAKSSKGRPTIEVVFDELDKVYRDMKSREKAKQDSCLSTTSTSSSKSPKTPSPSSLT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00030 556 ProSiteProfiles Protein kinase domain profile. 271 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi166g00030 556 SUPERFAMILY Protein kinase-like (PK-like) 250 516 IPR011009 -
Sebi166g00030 556 Pfam SPARK 30 186 IPR043891 -
Sebi166g00030 556 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 551 - -
Sebi166g00030 556 FunFam probable receptor-like protein kinase At5g59700 333 536 - -
Sebi166g00030 556 Gene3D Transferase(Phosphotransferase) domain 1 337 536 - -
Sebi166g00030 556 MobiDBLite consensus disorder prediction 525 556 - -
Sebi166g00030 556 SMART serkin_6 271 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi166g00030 556 Pfam Protein tyrosine and serine/threonine kinase 276 447 IPR001245 GO:0004672|GO:0006468
Sebi166g00030 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Sebi166g00030 556 MobiDBLite consensus disorder prediction 533 556 - -
Sebi166g00030 556 Gene3D Phosphorylase Kinase; domain 1 233 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00030 Sebi-Chr166 390963 394093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00030 242 514 Receptor kinase-like Gene Family AT3G19300 36.455 2.38e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sebi166g00030 Pkinase 2.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00030 - - gmx:100807158 746.888