Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00026 ATGGAATCGCAGCGGAGCCCAGGAGCCACGGAAATTAGTGACAAAAAGACCAAACTTTCAGCATTGATAGTGGATGATGATGGTGTGATTCGCTCAATCCACAAGGCCATGCTAGAAGGGTTATTTAAAATTGAGACAAAACTGGCTAAGAATGGAAAGGAAGCAGTGGATCTGCATTGTTCTGGGGCAAATTTTGACATAGTTTTCATGGACAGAGAAATGCCTATCATGGATGGCATTGAGGCAACAAAACAGCTGCGTGCTATGGGTGTGAAGAGCATGATTGTGGGAATAACTACCCGTGCTGATGGTATAGAAGGAGAGGAATTTCTAGCAGCTGGGTTGAACAAATGCTTTGGGAAGCCTCTTACCAGTGCAATCATTGAAGCTGTCTTGCAAGATCTTCAAGATTAA 414 0.4372 MESQRSPGATEISDKKTKLSALIVDDDGVIRSIHKAMLEGLFKIETKLAKNGKEAVDLHCSGANFDIVFMDREMPIMDGIEATKQLRAMGVKSMIVGITTRADGIEGEEFLAAGLNKCFGKPLTSAIIEAVLQDLQD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00026 137 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 136 - -
Sebi166g00026 137 Gene3D - 2 136 - -
Sebi166g00026 137 ProSiteProfiles Response regulatory domain profile. 20 136 IPR001789 GO:0000160
Sebi166g00026 137 Pfam Response regulator receiver domain 22 128 IPR001789 GO:0000160
Sebi166g00026 137 SMART REC_2 19 132 IPR001789 GO:0000160
Sebi166g00026 137 SUPERFAMILY CheY-like 18 135 IPR011006 -
Sebi166g00026 137 CDD REC_hyHK_CKI1_RcsC-like 22 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00026 Sebi-Chr166 336753 337244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00026 3 137 Response Regulator Gene Family AT3G04280 46.099 5.32e-31 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi166g00026 Response_reg 1.6e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00026 - - gmx:102665311 172.94