Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00018 ATGAACAAAACAAAAGGCAATGTAGGTCAAGGTTTCACTCCACATGTAATTGCTGTCGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGCATTCTGTCTGCATCTGGTGCCATCTCTAATGCCTCTCTTCGTCAACCAGCATCCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCCTATGTTCGTAATGAACTTGGAGGTCGAAGTGGTGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGAGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTTGACACCAAGAAGGATACAGGTGCTGGTGTAAAAGGTGATGCCTCTGCTAGCAAGTTGCCATCACCAGTTGGTGAATCAGTATCAAGTTTAGGTTTCCGCCAAACAGTTGACTGTTCCAGTGGGAATCCAATCCGGGGAAATGATGAGCATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGTCACGCCTTCCCGGTCCACAGACTGGGGTGGTCATCCAGACTCAAGAAATGCTGGTTATGATCTGACAGGAAGAACAGGTCATGGGGCACACCAGTCTCCTGAGAATGGGGGCTATGACCAAATTCCTGATTGA 711 0.4627 MNKTKGNVGQGFTPHVIAVAAGEDVGQKIMLFMQQSRREMCILSASGAISNASLRQPASSGGNITYEGRFEIISLTGSYVRNELGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFLDTKKDTGAGVKGDASASKLPSPVGESVSSLGFRQTVDCSSGNPIRGNDEHQAMGGSHFMIQQLGLHVTPSRSTDWGGHPDSRNAGYDLTGRTGHGAHQSPENGGYDQIPD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00018 236 Gene3D - 14 137 - -
Sebi166g00018 236 ProSiteProfiles PPC domain profile profile. 8 149 IPR005175 -
Sebi166g00018 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 14 124 IPR005175 -
Sebi166g00018 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 11 125 - -
Sebi166g00018 236 CDD DUF296 13 124 IPR005175 -
Sebi166g00018 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 150 IPR039605 GO:0003680
Sebi166g00018 236 MobiDBLite consensus disorder prediction 195 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00018 Sebi-Chr166 206981 210324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00018 6 236 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 55.600 4.34e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00018 - - gmx:100809675 405.216