Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00017 ATGGCCAACCCATGGTGGAGCGACCCAGTGGGTCTCTCTGGAATGGACAACAACCCATCTCCCATGAAAAAGCCCGATCTGGGTTTCTCCATGAACGACAGTACCCATAAAGACCATCAGGAGAAAGAAAACAGCGAGGAGGCCAAAGAAGGAGCTACCGAGACGGGCCCCATGCGCCGGGCCAGGGGCCGCCCACCGGGCTCAAAGAACAAGCCCAAACCGCCTGTATTTGTGACCAGAGACGGCCCAAATGCACTTCGAAGCCACGTCATGGAGATAGCAAACGGAGCAGACATCGCCGATAGCTTGATTCAGTTCGCGAGAAGGCGTCAAAGAGGTGTCTGCGTCCTCAGCGGCACCGGAACCGTCACCAACGTCACTCTCCGGCAGCCCTCGTCTCCCGGAGCTGTGATGGCACTTCAAGGCCGCTTCGAGATAATATCGTTGACCGGTTCGTTCCTGCCCGGAGCTTCACCGCCGGGATCGACAGGTCTAACGGTTTACATGGCGGGAGGTCAGGGACAAGTGGTGGGCGGTGGGGTGGTGGGCCCGCTGGTAGCATCAGGAGCGGTTATGATAATGGCGGCTACATTTTCCAATGCTGTGTATGAGCGGTTACCGTTAGCGATTGAGGAGGATGAAGATGGGGGACACGGAGATCAAGGTGAGGGTTCGTCTTCAATTATTCCTGCACCGTATAATAATTTGGTTCCTCCTCCTCATCCACAGTTGAACAACCATGAAGCTTATTCTTCTCCTTTTTCTAATGCTCATCCCAGGCTGAGGTCACCTTATTGA 798 0.5501 MANPWWSDPVGLSGMDNNPSPMKKPDLGFSMNDSTHKDHQEKENSEEAKEGATETGPMRRARGRPPGSKNKPKPPVFVTRDGPNALRSHVMEIANGADIADSLIQFARRRQRGVCVLSGTGTVTNVTLRQPSSPGAVMALQGRFEIISLTGSFLPGASPPGSTGLTVYMAGGQGQVVGGGVVGPLVASGAVMIMAATFSNAVYERLPLAIEEDEDGGHGDQGEGSSSIIPAPYNNLVPPPHPQLNNHEAYSSPFSNAHPRLRSPY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00017 265 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 208 - -
Sebi166g00017 265 MobiDBLite consensus disorder prediction 212 265 - -
Sebi166g00017 265 FunFam AT-hook motif nuclear-localized protein 86 215 - -
Sebi166g00017 265 MobiDBLite consensus disorder prediction 30 57 - -
Sebi166g00017 265 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 200 IPR005175 -
Sebi166g00017 265 CDD DUF296 87 170 IPR005175 -
Sebi166g00017 265 ProSiteProfiles PPC domain profile profile. 83 224 IPR005175 -
Sebi166g00017 265 MobiDBLite consensus disorder prediction 1 82 - -
Sebi166g00017 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 221 IPR014476 GO:0003680
Sebi166g00017 265 Gene3D - 86 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00017 Sebi-Chr166 184961 185758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00017 1 236 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 59.677 4.45e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00017 - - cave:132171996 314.309