Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00013 ATGCTTGCAAATAAAGTTCCTGGGCATGAATGTATTTATTCCCAGGAGACTTCAATTGTGGCTTCTGATTCTGACTTCATTGGTGATGTGCATGGTCAATATTCCGATCTTTTGAGGCTTTTTGAGTATGGTGGATTACCTCCTGAGGCTAACTACTTGTTTTTGGGGGATTATGTGGATAGGGGGAAGCAGAGTTTAGAAACAATTTGCCTTCTCCTTGCTTATAAAATAAGATATCCTGAGAACTTTTTCTTGTTAAGGGGAAACCATGAATGTGCTTCTATAAATCGGATATATGGTTTTTATGATGAGTGCAAGAGAAGGTTCAATGTGAGGTTATGGAAGACATTTACAGACTGCTTCAATTGCCTTCCTGTGGCAGCCCTCGTCGATGAAAAGATTTTGTGTATGCATGGGGGACTTTCTCCCGACTTACATAATTTGGATCAGATTAGAAGTCTACAGCGGCCCACTGATGTTCCTGATACAGGTTTGCTGTGTGATCTTCTTTGGTCTGACCCAAGCAAAGATGTTCAAGGATGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAACATGATCTTGATCTAATTTGTCGTGCGCATCAGGTTGTGGAGGATGGATACGAGTTCTTTGCTAACCGACAGCTTGTAAACAATATTTTCAGCACCTAA 708 0.4096 MLANKVPGHECIYSQETSIVASDSDFIGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLHNLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVNNIFST 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00013 235 SUPERFAMILY Metallo-dependent phosphatases 25 229 IPR029052 -
Sebi166g00013 235 ProSitePatterns Serine/threonine specific protein phosphatases signature. 86 91 IPR006186 GO:0016787
Sebi166g00013 235 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 25 234 - -
Sebi166g00013 235 FunFam Serine/threonine-protein phosphatase 21 235 - -
Sebi166g00013 235 Gene3D - 9 235 IPR029052 -
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 85 109 IPR006186 GO:0016787
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 23 50 IPR006186 GO:0016787
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 205 225 IPR006186 GO:0016787
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 119 145 IPR006186 GO:0016787
Sebi166g00013 235 PRINTS Serine/threonine phosphatase family signature 148 175 IPR006186 GO:0016787
Sebi166g00013 235 SMART pp2a_7 6 234 IPR006186 GO:0016787
Sebi166g00013 235 Pfam Calcineurin-like phosphoesterase 26 215 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00013 Sebi-Chr166 146429 147847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00013 8 211 Calmodulin-binding Proteins AT5G63870 29.796 2.39e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00013 K06269 - gmx:100808597 424.861