Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00004 ATGGCTTCGGCAATCTCAAACATACTGCACTGCCCTAAATTGAGCTTCTCCCATAAGAATTTCCGTCCCAAAGTTTCAACCTCCCTCAGGTTTCCCAAGACGACAGCTACATGGAGTGATAGAAAGATTTCATGTGCTGCTGCATCTGCAGCAGGAAGCTCTAATCCTGATGGTGACTTAAATCCTTACGAGGTTCTAGGTGTAAGCCCTATTGAGAAGTTTGACATGATCAAGGCAACATATACCAAAAAAAGGAAGGAGGCTGACATGAAAGGCGATGAAGCAACTGCTTCCAGATTGGAAAAGGCATATGACAAAATCATGATGGCTCAATTGTCTAATCGGAAAAAGGGTGTGACTTTTGGATCATTTAAGGTTTCAAAGGATATCAAGTATGCTGACAAGCAGCCAATTATACCTTGGGGGCCAAGGTTTGCTAAATCAAATAAAAATGATATACAGATCAACTTGGCAATATCTGCTGTTTTTACAGCTTGGATCCTTGTCAAGCGCAGTGCTGAATATAAACCATTGCAGTTTTTAGCCTTTGCTTTTGTTTATAGGCTTTTTGAGAAGTTAAAATCCTTTGAATCTCCTGTAACCCCCACATATAATGAAGATGGTGAAGATACAGGAGAAGGACTGCGCATGGGAAAGCGACTGCTACGATCACTGGCCTTGGTTTTTGGATGTGTAGCTGTTTCATCCTTGGGATACACTTTCATTTTGAACATAATTGAGTATGCAGGTGGTTATATTCCCACTATTCTTTACAACAGTCAGGTGAGGAGGGTAGGGTTGGAGTCTGCGCTTGCTTGCTCCGAGTCTGACATAATATACAAACTCCGACAAGGCCGGCAAGGCAAACTAACCCTAGAATCGAGTGGGGGCGATAAAAGAGTTGCGAAGATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAACCAGTGGGCTCGAATCTCATCGCTTCTTGTTCGCAAATCTGCCAAGCAGTGCAAGGCTCGTTGGTATGAGTGGCTCGATCCTTCCATTAAAAAGACTGAGTGGACAAGAGAAGAGGATGAGAAACTACTTCATCTTGCCAAGCTTATGCCCACACAATGGAGAACAATAGCTCCAATTGTTGGCCGTACCCCTTCCCAGTGCCTTGAACGTTACGAGAAACTCCTTGATGCAGCCTGTGTAAAGGATGAGAATTATGAACCAGGTGATGACCCCCGGAAATTGCGTCCTGGGGAAATTGATCCAAATCCTGAGTCAAAGCCTGCACGCCCTGATCCTGTTGATATGGACGAGGATGAGAAGGAGATGCTTTCTGAAGCTAGAGCTCGGTTAGCCAACACCAAAGGCAAAAAGGCCAAAAGGAAAGCCAGGGAGAAACAACTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAAAAAAAGAGGGAACTGAAGGCTGCTGGAATTGACATCAGGCATCGGAGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCCTTTGAGAAGAGGCCTCCTCCAGGGTTTTTTGATGTTGCTGATGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAAAGAAGGGTTGATGTTGAAGCACATCTCAGAAAGCAAGACGCTGCAAAGAATAAAATTGCACAAAGGCAAGATGCTCCATCTGCTATTCTGCATGCCAACAAGCTGAATGATCCTGAAACAGTTAGAAAAAGATCTAAATTGATGCTTCCACCACCCCAGATATCTGACCATGAATTGGATGAAATTGCAAGGTTGGGTTATGCCACTGACCTTGCAGGCAGTGAAGAACTCACAGAGGGTAGTAGTGCTACTCGTGCTCTTCTAGCTAATTATGCACAGACACCCAGCCAAGGAATGACACCTTTAAGAACTCCTCAGAGAACACCGGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCAGACACCATTGTTAGGAGGAGAGAACCCAGAATTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCAAACTCCAAATCCAATGCTGACTCCCTCTGCAACTCCTGGAGGTACTCCTGGAGGTGCAGGCCTTACTCCCAGGAGTGGTATGACACCAGCAAGGGAAGGTTTTTCTTTTGGCATAACTCCAAAGGGGACTCCTCTCAGGGATGAGCTACATATTAATGAAGACATGGATATGCATGACAATGCTAAGCTTGAGCTACGGAGACAAGCTGATATGAAAAGAAGTTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGACAGAATAGCTAGAGAAAAAGCAGAAGAAGAGGCTCGACAGCAGGCATTACTAAGAAAACGATCAAAAGTCCTTCAAAGGGGACTTCCTAGGCCTCCTGCTACATCTTTGGAGCTTATTAGAAACTCCTTGATAAGAGCTGATGGGGACAAGAGTTCATTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATAAGAAAGGAGCTCCTAACCTTACTGGAGCATGACAATGCCAAGTATCCACTTGATGAGGTAGTGAATAAGGATAAAAAAAAAGGAGCCAAGCGTGTAGCAAATGGGCCTGCTGTCCCTGTGATAGAAGATTTCCAGGATGATGAGATGAAAGATGCTGATCAGTTGATAAAGGATGAAGCCCAGTATCTCCGTGTGGCAATGGGGCATGAAAGTGATTCCCTTGATGATTTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGCCACCCGTAATGCCTATGGTCTATCTAGTGTTGCTGGAAACATGGAGAAGCTAGCAGCTTTGCAGGGTGAATTTGAGGATGTGAGAAGCAAGTTGGATGATGGTAAGGAGAAGATGGTACGTCTTGAGAAGAAGGTTACAGTACTCACGCAAGGCTATGAGATGAGAGCAAAAAAAAGTCTTTGGCCACAAATTGAAGCAACTTTCAAGCAGATGGACATAGCTGCAACAGAATCGGAATGTTTTCAAGCTTTACAAAAGCAGGAACAATTAGCAGCATCACACAGGATAAATAATCTTTGGACTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTTTACAAAAGAGATATGGGGATCTTATAGCAGAGATTGAAAGGTTACAAAATGTCATGAACCAGTTACGGGCACAAGCACAACAGCAAGAAGAAATTGAAGCAAAGAATCGTGCACTTGAGCTTACTGAAGCCACAGCTGATCAAATTAATGTGCAGGGTTCAGAGAATAATGAAGCCGTACCCCTCTCAGCTGACCAGCAAGTAGACATTGTGCAAGATCAGGCCACTTCTAGCTCCAAAAATGATATGGATGTGGATTCTTGTAAAGAGGAAACAACACACAACACTGATATTAAATTGCCAGATGCACCTGCTGCTGAGGATGAGAGTGCAAACGTGGCAGAAGGTAAAAACACTGGCAGTGATATTGACAACAAAGAAACCACACTAGATGTGAGTGCTGCAGTGGAAATAAGTAGTATTGAGGGAAATGGGGAAGAGGATCGAAATGTTGAGAATCCAGATGAGGTTGTAGAAGCTGTAAACAAACCTGATAATAGCTTAAGAGAAAGCAACCCCCTTGATGAGGGGGATAACATGCAATTTGCTGATGGCAAAGGAGAGGAGGTAAATTAG 3849 0.4362 MASAISNILHCPKLSFSHKNFRPKVSTSLRFPKTTATWSDRKISCAAASAAGSSNPDGDLNPYEVLGVSPIEKFDMIKATYTKKRKEADMKGDEATASRLEKAYDKIMMAQLSNRKKGVTFGSFKVSKDIKYADKQPIIPWGPRFAKSNKNDIQINLAISAVFTAWILVKRSAEYKPLQFLAFAFVYRLFEKLKSFESPVTPTYNEDGEDTGEGLRMGKRLLRSLALVFGCVAVSSLGYTFILNIIEYAGGYIPTILYNSQVRRVGLESALACSESDIIYKLRQGRQGKLTLESSGGDKRVAKMRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRHRRRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPTTIEELEGKRRVDVEAHLRKQDAAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELDEIARLGYATDLAGSEELTEGSSATRALLANYAQTPSQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGTPGGAGLTPRSGMTPAREGFSFGITPKGTPLRDELHINEDMDMHDNAKLELRRQADMKRSLRSGLSSLPQPKNEYQIVMQPVPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRGLPRPPATSLELIRNSLIRADGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDEVVNKDKKKGAKRVANGPAVPVIEDFQDDEMKDADQLIKDEAQYLRVAMGHESDSLDDFVEAHTTCINDLMYFATRNAYGLSSVAGNMEKLAALQGEFEDVRSKLDDGKEKMVRLEKKVTVLTQGYEMRAKKSLWPQIEATFKQMDIAATESECFQALQKQEQLAASHRINNLWTEVQKQKELEKTLQKRYGDLIAEIERLQNVMNQLRAQAQQQEEIEAKNRALELTEATADQINVQGSENNEAVPLSADQQVDIVQDQATSSSKNDMDVDSCKEETTHNTDIKLPDAPAAEDESANVAEGKNTGSDIDNKETTLDVSAAVEISSIEGNGEEDRNVENPDEVVEAVNKPDNSLRESNPLDEGDNMQFADGKGEEVN 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00004 1282 Gene3D - 308 362 - -
Sebi166g00004 1282 Gene3D - 363 417 - -
Sebi166g00004 1282 FunFam CDC5 cell division cycle 5-like 308 362 - -
Sebi166g00004 1282 Pfam pre-mRNA splicing factor component 709 961 IPR021786 -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 702 718 - -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 1252 1282 - -
Sebi166g00004 1282 Pfam Myb-like DNA-binding domain 313 373 - -
Sebi166g00004 1282 CDD SANT 313 356 IPR001005 -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 1174 1195 - -
Sebi166g00004 1282 SMART sant 361 408 IPR001005 -
Sebi166g00004 1282 SMART sant 309 358 IPR001005 -
Sebi166g00004 1282 ProSiteProfiles Myb-like domain profile. 305 356 IPR001005 -
Sebi166g00004 1282 SUPERFAMILY Homeodomain-like 336 409 IPR009057 -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 683 728 - -
Sebi166g00004 1282 ProSiteProfiles Myb-like domain profile. 357 406 IPR001005 -
Sebi166g00004 1282 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 304 1110 IPR047242 GO:0000398|GO:0000974
Sebi166g00004 1282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 361 410 IPR017930 -
Sebi166g00004 1282 Coils Coil 470 490 - -
Sebi166g00004 1282 FunFam CDC5 cell division cycle 5-like 363 423 - -
Sebi166g00004 1282 CDD SANT_CDC5_II 358 409 IPR047240 -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 1205 1221 - -
Sebi166g00004 1282 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 82 190 IPR021788 -
Sebi166g00004 1282 Coils Coil 1089 1136 - -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 416 453 - -
Sebi166g00004 1282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 305 360 IPR017930 -
Sebi166g00004 1282 Coils Coil 996 1023 - -
Sebi166g00004 1282 MobiDBLite consensus disorder prediction 1164 1221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00004 Sebi-Chr166 29071 42505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00004 304 1142 MYB-Related Transcription Factor Family AT1G09770 75.919 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi166g00004 Myb_Cef 1.5e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00004 K12860 - gmx:100801352 1473.76