Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi166g00003 ATGGTATCACTATCAGTGACAATGGCTAAGACACCTTGTTGTGAGAGGATGGGATTGAAGAAGGGACCTTGGACTGCTGAAGAAGATCAGATTTTGATTTCTCATATTCAACAATACGGCCATGGAAACTGGCGTGCGCTTCCTAAGCAAGCTGGTTTGTTAAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAATTACTTGAGGCCAGATATTAAGCGAGGGAAATTCAGCGAGGAAGAAGAAGATACCATCCTTAAGTTACATGAAGTTCTTGGGAATAGATGGTCTGCTATTGCGGCAAGATTACCAGGACGAACTGATAATGAAATAAAGAATTTTTGGCATACTCATTTGAAGAAGAAGGTGGAGAAAAGTGCAGTGCACAATGTCAATACCTTGCAAGGGGCACAAGCACATAGTCTATTTAGCATGCCACGAGTAGCCGCTGATGCATCAAGTGATGGTTCTGGTGTTGGTGGAAAAGTAGTGATTGCTAATTATGGTTCACCCTCTAGGAAGAATCCACCTATTGTAGGTTCTGGATTTTACAGTGCAGTCTCTTCTGATACTTCTTCAGGCGAAACCATGGGGAATCATGGTTCCAGTCAGCTCAGTGAAGAAATGGAATTTTGGTACAATATATTCATCAAAACAGGGCAGACATCATGA 672 0.4241 MVSLSVTMAKTPCCERMGLKKGPWTAEEDQILISHIQQYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSEEEEDTILKLHEVLGNRWSAIAARLPGRTDNEIKNFWHTHLKKKVEKSAVHNVNTLQGAQAHSLFSMPRVAADASSDGSGVGGKVVIANYGSPSRKNPPIVGSGFYSAVSSDTSSGETMGNHGSSQLSEEMEFWYNIFIKTGQTS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi166g00003 223 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Sebi166g00003 223 FunFam MYB-related transcription factor 20 73 - -
Sebi166g00003 223 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Sebi166g00003 223 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Sebi166g00003 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Sebi166g00003 223 Gene3D - 75 141 - -
Sebi166g00003 223 CDD SANT 76 119 IPR001005 -
Sebi166g00003 223 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Sebi166g00003 223 FunFam MYB transcription factor 76 123 - -
Sebi166g00003 223 Gene3D - 20 73 - -
Sebi166g00003 223 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 136 - -
Sebi166g00003 223 CDD SANT 23 68 IPR001005 -
Sebi166g00003 223 SUPERFAMILY Homeodomain-like 17 115 IPR009057 -
Sebi166g00003 223 SMART sant 20 70 IPR001005 -
Sebi166g00003 223 SMART sant 73 121 IPR001005 -
Sebi166g00003 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi166g00003 Sebi-Chr166 24560 25711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi166g00003 8 216 MYB Transcription Factor Family AT2G31180 48.148 5.16e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi166g00003 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi166g00003 K09422 - gmx:102663040 325.094