Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi165g00017 ATGGTTTTTAGGATACTCTTTTTGTTCCTGGCTTTTATGGTGACAAATTCAGCAGCTCTAACAGGCCAGCAGACATACATAGTACACATAGACAAGACCAAAATCAGACCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTTTGAATCAATCATTGATTTCATTTCTGAAGCTTCAATGGAGGAAGAACAAGAAGAGGATATTTTACCCCCTCAACTCCTCTATGCCTATGAAACCAGCATGTTTGGTTTTGCAGCTCAGCTTTCTGAGAAACAACTTAAATACTTGAACCAAGTAGATGGTTTCCTTTCAGCCATACCTGATGAACTACTAACCCTCCACACAACATACACTCCACAATTTCTTGGCCTAAGGAATGGTAAAGGACTTTGGAGTGCTCCCAACTTGGCCACAGATGTGATCATTGGGCTCCTTGATTCAGGAATTTGGCCTGAACACATCAGTTTCAAAGACTCAGGTTTGTCCCCAGTACCTCATAGCTGGAAAGATTATCGTTCCCCTAGAGATTCTCAAGGACATGGAACACACACTGCCTCAACAGCAGCTGGTGATATGGTGAAAAATGCAAACCTTTTTGGCCTGGCTAAAGGTTCAGCAAGTGGAATGAGGTATACCTCAAGAATTGCAGCTTATAAAGTATGTTGGCGTGCTGGCTGTGCTAATTCTGATGTATTAGCAGCCATGGATCAAGCAGTTTCTGATGGGGTTGATGTATTGAAATTCAGGTCCTTTTGCATCAACAGTTGGAAATGGTGCCCATGGATCATGACAGTTGCTGCTAGCTACACTGATAGAAGCTTTCCAACAAAAGTGAAACTTGGCAATGGAAAGACTTTTGAAGGGACATCTTTATATCAAGGCAAGCAGACAAACCAATTGCCTCTTGCTTATGGCAAATCAGCAGGAATAAATAGTAGAACTGAAAAGGGAGAGGAAGTGAAAATGGCAGGTGGGGCAGGAATGATACTAATTAACTCTGAAAATCAAGGTGAAGAGCTTCTTTCTGACCCTCACATTTTGCCAGCTACTTCCTTAGGTGCTTCAGCAGCATTTTCTTCTAGAGGACCAAGCATAATTGGACCAGATGTGATTAAGCCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCATCTCAAACTAGTCCAAGCTTGCTCATGAGTGACAAAAGAAGGGTACTTTTTAACATAATCTCAGGTACCTCAATGTCTTGCCCTCATGTTAGTGGCATAGCAGCATTGCTTAAATCTGTGCATAAAGATTGGTCTCCTGCAGCTATCAAATCTGCTCTAATGACCACTGCTTACACAATGAACAATAAAGGAGCTCCAATTTCAGACCTTGCCTCAAATCACTCAGCTTTTGCTAACCCTTTGCATTTGGTTCAGGCCATGTTAACCCAGAAAGTGCTTCTGATCCAGGTGATTCAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTTCTATTTGGAAGAAGTGCCTTAAATGCTAGTGTTACATACAAGAGAGTTGTCACAAATGTTGGAAAACCCCAAAGTGTTTATGCAGTTAAAGTGGAACAACCAAATGGAGTTTTAGTTACAGTTGAACCAAGGAAATTGCAGTTTCAAAACTGGATTACCCCCATCACCCTCCCATTCTGGTCCATTGGAATATTCTTACCCCCTCCTCATCAAGCACCCTCCTCAGCCCCTCCTACTGCCCCCTATAGCTACCATCTTCCACCATCTTACCCTTATCCCTACCATATTCCTCCAGGGAGTCATAGTTCTCCTAGTCCTAGGCCTTCCCTTTCACACCATCCCAGTTTACCACATGGATCATCTCATTACTATTATCAACAAAATGAGGCCTATTCATCTCATGAAGATAAACCTGGTGCCCATATGCATGCCAATAGCTTCTCTGGCCCCTACTGGCAGGAGACCCCTAGCTCCACAGGAGGTGAAGAAGTATCACAAACTAGTATTGGTTCCAAGCCTTCTCAGAATTCTGCTTACCCACCTTTGGATGATCTTATGAACAATGTTCAGTTGTCTGATAACCAGCCAAGTGCTCCTGCATCACCCCCTGCACCTGCAGTGCAGCCACTGATGCATTCCATGTCAGTTCCAAAGATACAACAGAAGAAGGAGGAGTTTTATGGATATTCTAATAACTCCTTCTCGGGTTGGGGATCCTCCTACCCTGGTCAGGTGGATTCATCTAAGCTTTCAGAATTTTCTGGCTCATTTAATGAATCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAATGCAGAATAAAGGATCCTTGAGAGTTTTGCTCCTGCATGGAAATTTAGATATATGGGTTCTTCAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGAGACATGTTTGGTAGATTACCTGGTAATGTGAGCAATAAAATTGAAGGAACTGTGAATAGGAAGATTACTAGTGATCCTTATGTGTCAATTTCAGTATCAAATGCTGTAATTGGAAGGACTTTTGTCATTAGCAACAATAGTGATGTTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAACAAATATACTCAGGGGAAAAAGTTGAAGGAACCTACCCTATCCTGAATAATAATGGAAAGCCTTGTAAGCAAGGTGCTGTTCTGAGCCTATCCATTCAGTACATCCCAATGGAGAGGCTAAGCATTTATCATCAAGGAGTTGGAGCAGGGCCTGAGTACATTGGTGTTCCTGGCACATATTTTCCTTTGAGGAAAGGTGGAGCTGTTACTCTATATCAAGATGCACATGTCCCAGATGGAACCCTCCCTAATGTGTTGCTTGACAATGGGACATATTATGTACATGGAAAGTGTTGGCATGACATCTTTCATTACATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTATGGCACAAAGTTAGGTTGGTAAGGGATGCTGGTTATGCATCAGATTATACCTTGGGTGATCTTCTGAGATCAAAATCACAGGAGGGAGTAAGAGTGCTTCTCCTTCTTTGGGATGATCCTACATCAAGAAGCATTTTGGGTTATAAAACTGATGGTGTCATGGCAACTCATGATGAGGAAACTAGACGATTTTTTAAGCACTCTTCAGTGCATGTGCTGCTTTGTCCTCGGATTGCTGGAAAACGACATAGCTGGATCAAGCAAAAGGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGATTTGCATTCTAGAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACATGGGATAAAAAAGTTGAAAATTTCATATGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATGACTGATCTTCCCTGTCCTGATGATGATCCTGAAGCTTGGCATGTGCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAGGGATTTCCTAAGAATCCAAGAGAAGCAACTGGAAAGAACCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCTTTCAATTGGAATAACACAGAGACCTGGTACAGGACTCTCTTTCTGCTTCAAACTGTTATTTATGCTTTCAAAAACTGCATCAGCTTTGGTGCCAATAATTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATTAAAGCAAATGAGAGGTTCGCAGTGTATATTGTTATACCAATGTGGCCAGAGGGTGTTCCAACAGGCGCTGCCACACAAAGGATTCTATTTTGGCAGGCAGCTAGTCGAAATAATCGACGTTTCATGATCTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTATATTGGGATCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCCTACCAACCTCATCATACCTGGGCAAGAAAACATTCTAATCCACACGGACAAGATGTCACTTTGGGCAGAACATACAGGAACAATTGATGACTGCTTCCTGCAACCTGAGAGCCTTGAATGTGTGCGAAGGATTAGATCAATGGGTGAAATAAACTGGCAACAATTTTCAGCAAATGAAGTAACAGAGATGAGAGGGCATCTACTAAAATACCCGGTAGAAGTTGATCGAAAGGGAAAAGTTAGACCCCTTCCGGGCTATGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAGGAGAACCTAACCATTTAA 4380 0.4208 MVFRILFLFLAFMVTNSAALTGQQTYIVHIDKTKIRPSIHSQDSTKPWFESIIDFISEASMEEEQEEDILPPQLLYAYETSMFGFAAQLSEKQLKYLNQVDGFLSAIPDELLTLHTTYTPQFLGLRNGKGLWSAPNLATDVIIGLLDSGIWPEHISFKDSGLSPVPHSWKDYRSPRDSQGHGTHTASTAAGDMVKNANLFGLAKGSASGMRYTSRIAAYKVCWRAGCANSDVLAAMDQAVSDGVDVLKFRSFCINSWKWCPWIMTVAASYTDRSFPTKVKLGNGKTFEGTSLYQGKQTNQLPLAYGKSAGINSRTEKGEEVKMAGGAGMILINSENQGEELLSDPHILPATSLGASAAFSSRGPSIIGPDVIKPDVTAPGVNILAAWPSQTSPSLLMSDKRRVLFNIISGTSMSCPHVSGIAALLKSVHKDWSPAAIKSALMTTAYTMNNKGAPISDLASNHSAFANPLHLVQAMLTQKVLLIQVIQAGDLNYPSFAVLFGRSALNASVTYKRVVTNVGKPQSVYAVKVEQPNGVLVTVEPRKLQFQNWITPITLPFWSIGIFLPPPHQAPSSAPPTAPYSYHLPPSYPYPYHIPPGSHSSPSPRPSLSHHPSLPHGSSHYYYQQNEAYSSHEDKPGAHMHANSFSGPYWQETPSSTGGEEVSQTSIGSKPSQNSAYPPLDDLMNNVQLSDNQPSAPASPPAPAVQPLMHSMSVPKIQQKKEEFYGYSNNSFSGWGSSYPGQVDSSKLSEFSGSFNESVHSQSLQIVPMQNKGSLRVLLLHGNLDIWVLQAKNLPNMDMFHKTLGDMFGRLPGNVSNKIEGTVNRKITSDPYVSISVSNAVIGRTFVISNNSDVVGSQLIGIVAIPVEQIYSGEKVEGTYPILNNNGKPCKQGAVLSLSIQYIPMERLSIYHQGVGAGPEYIGVPGTYFPLRKGGAVTLYQDAHVPDGTLPNVLLDNGTYYVHGKCWHDIFHYISQARRLIYITGWSVWHKVRLVRDAGYASDYTLGDLLRSKSQEGVRVLLLLWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQKGNVGGCPREPWHDLHSRIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGMTDLPCPDDDPEAWHVQIFRSIDSNSVKGFPKNPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNNTETWYRTLFLLQTVIYAFKNCISFGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQAASRNNRRFMIYVHSKGMIVDDEYVYWDLQTSTNALWKEQGTVRLQWEPTNLIIPGQENILIHTDKMSLWAEHTGTIDDCFLQPESLECVRRIRSMGEINWQQFSANEVTEMRGHLLKYPVEVDRKGKVRPLPGYEEFPDVGGKIVGSFLAMKENLTI 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi165g00017 1459 Pfam Fibronectin type-III domain 490 548 IPR041469 -
Sebi165g00017 1459 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 115 IPR037045 -
Sebi165g00017 1459 Gene3D C2 domain 777 855 IPR035892 -
Sebi165g00017 1459 MobiDBLite consensus disorder prediction 603 631 - -
Sebi165g00017 1459 CDD Peptidases_S8_3 112 446 IPR034197 -
Sebi165g00017 1459 MobiDBLite consensus disorder prediction 168 187 - -
Sebi165g00017 1459 Gene3D - 272 318 - -
Sebi165g00017 1459 Gene3D Endonuclease Chain A 1168 1298 - -
Sebi165g00017 1459 SUPERFAMILY Phospholipase D/nuclease 956 1116 - -
Sebi165g00017 1459 ProSiteProfiles Serine proteases, subtilase domain profile. 117 475 - -
Sebi165g00017 1459 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 775 905 IPR035892 -
Sebi165g00017 1459 SUPERFAMILY Subtilisin-like 114 456 IPR036852 GO:0004252|GO:0006508
Sebi165g00017 1459 Gene3D Endonuclease Chain A 1066 1130 - -
Sebi165g00017 1459 MobiDBLite consensus disorder prediction 646 695 - -
Sebi165g00017 1459 Gene3D - 471 551 - -
Sebi165g00017 1459 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Sebi165g00017 1459 PRINTS Subtilisin serine protease family (S8) signature 177 190 IPR015500 -
Sebi165g00017 1459 PRINTS Subtilisin serine protease family (S8) signature 409 425 IPR015500 -
Sebi165g00017 1459 Pfam Peptidase inhibitor I9 25 115 IPR010259 -
Sebi165g00017 1459 MobiDBLite consensus disorder prediction 593 706 - -
Sebi165g00017 1459 Pfam Subtilase family 140 450 IPR000209 GO:0006508|GO:0008236
Sebi165g00017 1459 ProSitePatterns Serine proteases, subtilase family, serine active site. 410 420 IPR023828 -
Sebi165g00017 1459 Pfam Phospholipase D C terminal 1379 1449 IPR024632 -
Sebi165g00017 1459 Pfam C2 domain 782 851 IPR000008 -
Sebi165g00017 1459 Gene3D Peptidase S8/S53 domain 171 248 IPR036852 GO:0004252|GO:0006508
Sebi165g00017 1459 Gene3D Peptidase S8/S53 domain 352 457 IPR036852 GO:0004252|GO:0006508
Sebi165g00017 1459 Gene3D Peptidase S8/S53 domain 140 170 IPR036852 GO:0004252|GO:0006508
Sebi165g00017 1459 SUPERFAMILY Phospholipase D/nuclease 1144 1390 - -
Sebi165g00017 1459 PANTHER PHOSPHOLIPASE D 1081 1304 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi165g00017 Sebi-Chr165 327464 340311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi165g00017 1301 1459 Phospholipase D Gene Family (Wang group) AT4G00240 55.491 3.05e-50 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi165g00017 K01115 - jre:109011028 902.123