Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi165g00009 ATGGAGGGAGGTCGTATCCAATGCACGGTGAAGAACATTCATGTGTATCTGTTTGAGAATGGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGTATTCAGTTTAGTCAGTTAAGTGATCATGCTTCTTTGACCCTTGAGGAAGAATTTCTTGAAAGAGGAGTGTACAAATCAATTGCTGATTTGAAAGAAGTAACACAGCTTCGTGTAGTGGATGAGACAGATTCTGCATCTTTTATCTTATTTGATAAAGAAGCCTCAAATTTCCTGAAAATTCCTGCATATGAACTTCACACTTCATATATTGCCAAGGGTGGAGATAAGAATAGGCATCCCGAAGAGATTGATTCCTTTAAAGATAAGAAATTCCTTTTTAAAGTGCAAGTTAAGATTCAAGATATGGAGTCAATTGTTCCTTATGTCATTAGTATTTCAAGGCTTTGTTTTGAAGATAACATTATAGCTTCCTTTGAAAAGAAATACCAAATTGAAGAGGTAGCATTAATTCAAGACAACTCTGAACTTTTGAGTCAGTTTACTGAGTCCTCAGATCTGTTGAAGGACAATTTATCTGTGTCATGTGATAATGGAGTAGATACTCCAAGTCCCCTTTTACCGACTGGAAAAACGGCACCGAATATGGATTCAAGTGTTATAAAGGTTCTTGATGTGGATCTTGCTGAGTATTGTGGAAATGCAAGTTTTGATACTCCCTCAAAATGCAAGGGTGAGATGCATTCTGAACAGACCATAGTTCGCGTTGCTGTTCATGGTAATGAACAATCTGCTAAGAAGCTGAGGAAAGTTATCAAGGAAGAGAAGAATTAG 1233 0.3698 MEGGRIQCTVKNIHVYLFENGINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGIQFSQLSDHASLTLEEEFLERGVYKSIADLKEVTQLRVVDETDSASFILFDKEASNFLKIPAYELHTSYIAKGGDKNRHPEEIDSFKDKKFLFKVQVKIQDMESIVPYVISISRLCFEDNIIASFEKKYQIEEVALIQDNSELLSQFTESSDLLKDNLSVSCDNGVDTPSPLLPTGKTAPNMDSSVIKVLDVDLAEYCGNASFDTPSKCKGEMHSEQTIVRVAVHGNEQSAKKLRKVIKEEKN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi165g00009 410 SUPERFAMILY Nucleic acid-binding proteins 202 272 IPR012340 -
Sebi165g00009 410 SUPERFAMILY Nucleic acid-binding proteins 72 188 IPR012340 -
Sebi165g00009 410 Pfam Domain of unknown function DUF223 3 86 IPR003871 -
Sebi165g00009 410 SUPERFAMILY Nucleic acid-binding proteins 3 65 IPR012340 -
Sebi165g00009 410 Gene3D - 80 184 IPR012340 -
Sebi165g00009 410 Gene3D - 2 65 IPR012340 -
Sebi165g00009 410 CDD RPA1_DBD_B_like 92 167 - -
Sebi165g00009 410 Gene3D - 188 292 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi165g00009 Sebi-Chr165 250296 252788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi165g00009 2 187 Core DNA Replication Machinery Family AT2G06510 26.178 1.24e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi165g00009 - - adu:107477146 275.404