Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi165g00003 ATGCAACCACCCACGTTGTCTTCCTCCAATCCTTCCACACCTTCTGATCATAACAGCATCAATGATGAGAAGGAAACAAACAGAGAGGAGGAAAAACAAGAGGATCAGCAGCAGCAACATCAGAAGCAATTGAAGCTTGAATCAGATGAGGATGAACAGGAAACTATTCGAGTCCACAATGATAGCAATAAGAATTATGATAATAATGCAAATGCAACAACTTGTTCCAATGACAGAATCACAGACCCCAAGAGAGTCAAAAGCATCTTGGCAAATAGGCAATCTGCACAGAGATTAAGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGCGTGACTTCATTACAGGCTGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTGGATCATCAGCGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTGGCTCAAGACAAGATTTTCAAAGATGGTACCAAGCTTCAAAGGATGATGTTACCGTATATGTTTAGAACCACCACATTGTGCCTCGGGTCATGCCTTTCTCATGAGATGGTGGAGAAAAATGGTTTGGATGAGGGCAACAAGGAATAA 603 0.4229 MQPPTLSSSNPSTPSDHNSINDEKETNREEEKQEDQQQQHQKQLKLESDEDEQETIRVHNDSNKNYDNNANATTCSNDRITDPKRVKSILANRQSAQRLRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDGTKLQRMMLPYMFRTTTLCLGSCLSHEMVEKNGLDEGNKE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi165g00003 200 MobiDBLite consensus disorder prediction 1 79 - -
Sebi165g00003 200 Gene3D - 83 155 - -
Sebi165g00003 200 PANTHER BASIC LEUCINE ZIPPER 34 4 162 - -
Sebi165g00003 200 MobiDBLite consensus disorder prediction 1 17 - -
Sebi165g00003 200 MobiDBLite consensus disorder prediction 62 79 - -
Sebi165g00003 200 Coils Coil 20 50 - -
Sebi165g00003 200 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Sebi165g00003 200 CDD bZIP_plant_RF2 85 135 IPR044759 GO:0003700|GO:0006355
Sebi165g00003 200 MobiDBLite consensus disorder prediction 18 61 - -
Sebi165g00003 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Sebi165g00003 200 FunFam Transcription factor VIP1 83 154 - -
Sebi165g00003 200 Pfam bZIP transcription factor 84 127 IPR004827 GO:0003700|GO:0006355
Sebi165g00003 200 SUPERFAMILY Leucine zipper domain 84 138 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi165g00003 Sebi-Chr165 77747 79568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi165g00003 4 164 bZIP Transcription Factor Family AT3G58120 60.947 8.46e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi165g00003 bZIP_1 2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi165g00003 - - lang:109363232 204.912