Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi164g00045 ATGGTCATGCACACATTTGTTGATGTGACAAAGTCCATCTTTATGAAGATTGGCAGTGATGTGGATGGTACACTTCATTTTAATAGATGGTACAGACTTCACATCAGTGGGAATGGAGGATACATAAGACCCCTCCTTGAACAAGTCAAGCTGAAGTATGCTCATCTTGTTCACCTTGACGACCAAGGTGAACAAGAGGATATAGAGATTGAACAAGATCAAGGCTCATCTTGTTCATCTTGTTCACCTTGTCGTCAAGGTGAACAAGAGGAGCCTCCAAACAATGCAATGTATGCTTTGGAGGATAATAATGACGACAAACAAGATATAGAGATTGAGTCTGGCATGCGCTTTGAATCCTCTGAAGAGGTTAAGAGACTTTACCAGGAGTATGCAATTAGAAAAGGATTTTCTATCCTAACAAGGAATTCGAGGAAAGGTGTTGATGGCAAGCTCACATACTTCAACTTCAGCTTGACTTGTTCAAGGGAGGAGTCATATGTGTCCTTTGTTCCCACTAATGCGAAGTCTATACCATCTACTAAAATGAAGTGTATCGCCCACATCACTACCAATCTTCATAAAGATGGACTTTGGCACATCAACAAATGTGTGCATGACCATTCTCATGAGCTAAGCCCTGGAAAGTCCAG 653 0.4135 MVMHTFVDVTKSIFMKIGSDVDGTLHFNRWYRLHISGNGGYIRPLLEQVKLKYAHLVHLDDQGEQEDIEIEQDQGSSCSSCSPCRQGEQEEPPNNAMYALEDNNDDKQDIEIESGMRFESSEEVKRLYQEYAIRKGFSILTRNSRKGVDGKLTYFNFSLTCSREESYVSFVPTNAKSIPSTKMKCIAHITTNLHKDGLWHINKCVHDHSHELSPGKS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi164g00045 217 MobiDBLite consensus disorder prediction 67 92 - -
Sebi164g00045 217 MobiDBLite consensus disorder prediction 72 89 - -
Sebi164g00045 217 Pfam FAR1 DNA-binding domain 127 213 IPR004330 -
Sebi164g00045 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi164g00045 Sebi-Chr164 1634966 1635804 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi164g00045 FAR1 4.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi164g00045 - K01807 gmx:102667848 102.449