Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi163g00063 ATGAAGTGTTTCTTCTTCAAAGACAAGTCCAAATCCGCCCCAGAATTGCAGAACCAAAATAGAAAGAAGAACCCAGCTGCGAATCGAGCAGCCAATTCAACAGGCTCGATATCATCACCCAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGCACAACTTTAGAGTTTTCACTCTGCAAGAGTTAAGAGAAGCCACAAATGGTTTCAGTAGGACACTGAAAATTGGAGAAGGGGGTTTTGGGAGTGTGTATAGAGGATCCATTAGGCCTCAAGATGGAAAAGGTGATCCAATTACTGTTGCTATCAAAAGGCTTAACACTCGTGGCTTCCAAGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTAATCACCCAAATTTGGTCAAGCTTCTGGGTTATTGCTGTGTGGATGGAGAAAGAGGAATCCAAAGGCTTTTGGTGTATGAGTTCATGCCCAACAGGAGCTTAGAAGACCACCTTTTTCATAAATTATTATTTCCCCCCCTGCCGTGGAAATTAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCTTATCTACATGAGGGACTGGAGATTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTTCTATTGGATGAAAATTTCCACGCAAAGCTCTCAGATTTCGGTCTTGCTAGGGAAGGGCCACAAGGTGATGATACTCATGTATCTACTGCGGTGGTTGGTACACAAGGATATGCAGCACCAGAGTATATTGAAACAGGTCATCTCAAAGTTCAGAGTGATATGTGGAGTTTTGGTGTTGTACTCTATGAGATCCTCACAGGAAGACGATCATTGGAAAGAAACCGTCCAACAGCAGAACAAAAGCTACTAGATTGGGTTAAACAGTATCCAGCTGATAGTGGTAGATTCAGCATGATAATGGATCCACGTCTCATGAACCAATATTCACTTGGTGCAGCTCGCAAAATAGCCAAGTTGGCTGAAAGCTGCTTAAAGAAGAACCCTGAAGATAGACCTTCCATGAGTCAGATAGTGGAAGGATTGAAGCAAGCATTGGAATTTTCAGAAACTTCAAACACTCCTCAGAACACTGGTGAATCCTCTCGGTCTAAATTGGTTAGGAAAGGTAAATAG 1143 0.4261 MKCFFFKDKSKSAPELQNQNRKKNPAANRAANSTGSISSPKSVKDLYREKEHNFRVFTLQELREATNGFSRTLKIGEGGFGSVYRGSIRPQDGKGDPITVAIKRLNTRGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCCVDGERGIQRLLVYEFMPNRSLEDHLFHKLLFPPLPWKLRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHAKLSDFGLAREGPQGDDTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADSGRFSMIMDPRLMNQYSLGAARKIAKLAESCLKKNPEDRPSMSQIVEGLKQALEFSETSNTPQNTGESSRSKLVRKGK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi163g00063 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Sebi163g00063 380 MobiDBLite consensus disorder prediction 355 380 - -
Sebi163g00063 380 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Sebi163g00063 380 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 365 - -
Sebi163g00063 380 ProSitePatterns Protein kinases ATP-binding region signature. 75 103 IPR017441 GO:0005524
Sebi163g00063 380 PANTHER OS01G0588500 PROTEIN-RELATED 29 353 - -
Sebi163g00063 380 SUPERFAMILY Protein kinase-like (PK-like) 52 349 IPR011009 -
Sebi163g00063 380 Pfam Protein kinase domain 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi163g00063 380 FunFam Serine/threonine-protein kinase BIK1 36 154 - -
Sebi163g00063 380 CDD STKc_IRAK 75 353 - -
Sebi163g00063 380 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi163g00063 380 MobiDBLite consensus disorder prediction 1 42 - -
Sebi163g00063 380 Gene3D Transferase(Phosphotransferase) domain 1 155 376 - -
Sebi163g00063 380 MobiDBLite consensus disorder prediction 355 372 - -
Sebi163g00063 380 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi163g00063 Sebi-Chr163 1678128 1680759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi163g00063 3 351 Glycoside Hydrolase AT3G07070 43.056 7.21e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi163g00063 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi163g00063 - - gmx:100305403 630.943