Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi163g00060 ATGAAGTTCAATTCTTTAGGAATCATATGTTCGCTAGGAACACTGACTAAGAGAACAAAGAAGGCTGGCATTGTTGGAAAATACGGTACCCGTTATGGGGCTAGTTTGCGGAAGCAAATTAAGAAGATGGAAGTTAGTCAACACAGCAAGTTTTTCTGTGAATTTTGTGGAAAGTATGCTGTGAAGAGGAAAGCAGTAGGAATATGGGGATGCAAGGACTGTGGTAAAGTGAAAGCAGGCGGTGCCTACACTTTGAATACCGCAAGTGCCGTGACTGTAAGGAGCACCATCAGGAGGTTGAGGGAACAAACTGAGAGTTAA 321 0.433 MKFNSLGIICSLGTLTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi163g00060 106 NCBIfam ribosomal protein eL43 16 105 IPR002674 GO:0003735|GO:0005840|GO:0006412
Sebi163g00060 106 SUPERFAMILY Zn-binding ribosomal proteins 24 96 IPR011332 GO:0006412
Sebi163g00060 106 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 18 86 IPR002674 GO:0003735|GO:0005840|GO:0006412
Sebi163g00060 106 Gene3D - 15 106 IPR011331 GO:0003735|GO:0005840|GO:0006412
Sebi163g00060 106 PANTHER ZGC:171772 13 106 - -
Sebi163g00060 106 FunFam 60S ribosomal protein L37a 16 106 - -
Sebi163g00060 106 Pfam Ribosomal L37ae protein family 18 102 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi163g00060 Sebi-Chr163 1508643 1510040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi163g00060 15 106 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 92.391 2.97e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi163g00060 K02921 - twl:119982996 192.2