Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi163g00031 ATGTTGAACAAAGTATACACCAAGACCTTAGCTAGGCTCAACCAGCAGAAAAAGTGGGCTGTACCCCTGCAATATACAAATTCCAGAGCATCCTATTATAGCACCCCTGATGGCTATGGGTATCCAAGGGGAGCTTGTGGCTTTCGTGACTATGGAAGGACGGTTAATGACGGTAGTGTCGCAACTGTGTCTGCTAAGCTATGGAAGAATGGAGTTGGCTGTGGTGCATGCTATCAAGTTAGGTGCAAAATACCAGAATTATGTGATGTCAATGGAACATATGTGGTGGTAACAGACAACTATGGTCAGGGAGATGGAACAGACATCATTATGAGCCCACGAGGCTTCTCAAAATTGGGATCTAACCCAGCTGCAACTGACAAGTTGAAGAAATACAATGGAGTAGATATTGAATACAAAAGGGTCCCCTGTTCATTCAAGGGCAATAACATTGTGTTTCAGATCAATGAACAAAGTAAAAAGCCTGGTTACTTCTCTATCACGGTTCTCTATGTAGGTGGAACATATGATGTTACTGCTGTTGAGATGTGGCAGCAAGAACACAACAAATGGGAGCCTTTGCAAAGGACCAATGGGGCAGTGTTTGGATTTGGTAACCCACCAAACGGTGATATCCACTTGAGGTTCCAAGAGAGAAGGAGTACAGGGCTTAAATGGGTGAAGCTCTTGTTTCCAGTCCCTGCTAATTGGAAGGTTGGAGATACTTTTTCCTTTAATATGTAA 744 0.4341 MLNKVYTKTLARLNQQKKWAVPLQYTNSRASYYSTPDGYGYPRGACGFRDYGRTVNDGSVATVSAKLWKNGVGCGACYQVRCKIPELCDVNGTYVVVTDNYGQGDGTDIIMSPRGFSKLGSNPAATDKLKKYNGVDIEYKRVPCSFKGNNIVFQINEQSKKPGYFSITVLYVGGTYDVTAVEMWQQEHNKWEPLQRTNGAVFGFGNPPNGDIHLRFQERRSTGLKWVKLLFPVPANWKVGDTFSFNM 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi163g00031 247 SUPERFAMILY PHL pollen allergen 150 244 IPR036749 -
Sebi163g00031 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 149 IPR007112 -
Sebi163g00031 247 Gene3D - 10 144 IPR036908 -
Sebi163g00031 247 Pfam Lytic transglycolase 61 121 IPR009009 -
Sebi163g00031 247 Pfam Expansin C-terminal domain 151 225 IPR007117 -
Sebi163g00031 247 Gene3D - 145 245 IPR036749 -
Sebi163g00031 247 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Sebi163g00031 247 PRINTS Expansin/Lol pI family signature 42 60 IPR007118 GO:0005576
Sebi163g00031 247 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Sebi163g00031 247 PRINTS Expansin/Lol pI family signature 24 39 IPR007118 GO:0005576
Sebi163g00031 247 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Sebi163g00031 247 SUPERFAMILY Barwin-like endoglucanases 24 149 IPR036908 -
Sebi163g00031 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Sebi163g00031 247 PANTHER EXPANSIN-B3 24 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi163g00031 Sebi-Chr163 1025144 1026635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi163g00031 6 247 Expansin Gene Family AT4G17030 43.725 5.54e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi163g00031 - - vvo:131638174 323.553