Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi163g00026 ATGCCAAGGCCTTCTAGAATTTCAAACAGAGATCAAGGAGTAGCTGGAGGAATCATTCACCGTGATGTGAAATCCACCAACATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGAATTTGGCATTTCAAGGACAGGTTCTCTTGACCATCATCAACCATATGTCAGCACAGATGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTTATGTCACAACAGCTGACAGAGAAATCTGATGTCTATTCATTTGGGGTTGTTCTTCTTGAAGTGTCATGTGCATGA 291 0.4089 MPRPSRISNRDQGVAGGIIHRDVKSTNILLDENLVAKVAEFGISRTGSLDHHQPYVSTDVKGTFGYLDPEYFMSQQLTEKSDVYSFGVVLLEVSCA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi163g00026 96 PANTHER OS07G0166700 PROTEIN 15 96 IPR045272 GO:0004714|GO:0006468
Sebi163g00026 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi163g00026 96 SUPERFAMILY Protein kinase-like (PK-like) 17 95 IPR011009 -
Sebi163g00026 96 Gene3D Transferase(Phosphotransferase) domain 1 9 96 - -
Sebi163g00026 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Sebi163g00026 96 Pfam Protein tyrosine and serine/threonine kinase 18 94 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi163g00026 Sebi-Chr163 898137 899133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi163g00026 13 96 Receptor kinase-like Gene Family AT5G61350 72.619 3.33e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi163g00026 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi163g00026 - - lja:Lj0g3v0255899.1 151.369