Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00065 ATGGCCCCTTCTTCTCTGAGCATTGCTGATTCACAGTCTCCGTCAACAGCACCCGAAGTTGCAGAGAGCGATCTTCAGCCATTTTTTGTTCTTCATAAAGCTTCATCCCGAAGAAAAGATAGAACATCAACAGAAAAGGGAAAATTGCGCAAGAGAGATGAGCTATCTTCATCATCACCACCACAAAGTGCAAAGAAACTGGCAGGACGTACAACTGAAGAGTGTGATTGTCATTTGTTTCAGCAACTAAAGATTGAAACTTTTGAAATTGTTTGGACAAAGATTGAATCTACCATTAAGGACGTTTTGAGAGATCTCAATGCTAGTGTATTTAATGATATACAACAATGGGTTCTGGAGTGCTTCAATGCTACAAGATTGCTTGGAGAACCAAGTATTGCTGAAGCAACTAGGTCTTTTCCTGTTCTAAATGACACTACTCCTGGGCAGCTGTTTACTGCATTGGTCATTACCAGAAACATGGAGTTTGTTGATGATATATGGACATTTGAAGAGCTTGGAGATTACTTGAAATCCCATGGATGCCACGTGGCTATGCTTTCATCACCGGAGTTTTCATTAAAAAATGGAATTGCTGGTTGCCTGAAAGCCTTATTGCGAGAGCTTCTAGGGGGTGCTATCGACTCAGCTGATATATCAATCTTGGCATCATGGTATAGAGAACAAGACAACTACAATAAACCACTAGTGCTGATCATTAATGATTTGGAAAGATGTTGCGGATCAGTCTTAACCGATTTTATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACGACAATGGACACCCCAAGAAACATTTTGCCGTCATATGCTCTCGGGCATTTGTGTCCTTCTATGTTTATGCTTCGAACGCCAGCTGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGCACTACATTTAGTATTGGTCATAAAGTGGCACTCTTCCTCAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTACTATATTTCTCTATGGAACCTCTGAGTCTCATACATGGGCAAATACTCGCTGAAGATCAAAAGGAGGGAAAATCTACATTATCACCTGAGACTATGTTGAAATACATGGATGAACTTCCATTCTATGCAAGGAATCAAATGGTTGATCAGACCAGAAAGAGCATGGCAGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTATGGAGCACTGTGGTTCTCTGCCTATATGAAGCTGGAAAGTATAGTAGAGTGCGACTGCTGGATTTGTTCTGTGAAGCACTCGATCAAGATTTGTACCCATCTAGGGATTCTGGTTATCATGTGGGGGATGAAAAAGATCATGGGTTGTCCATGACAAATGATCCCTGTCAACAATATTCCATCATGCAAAGCGGCGGTTTTGTTTGCCAGATAGTACGCAAAGTGAGGGATCTCCCTACAGGAATGCTATATCAGTTGATTGAGAGCTGGGAAAAACTTATTGCAGATATTCCAGAGATTCATCAGAAACTGGAAATGTTGCAATCTTCAGTAAGATGTGAAGATGGAAAGAGTTCACGCAAGAGTTCCAAGGACATTTCCAAGAGATATTCGTCCAGGGTTTCAGTAAACATTGACAAGGACTCGAGAGGGTTAAACTCACAAGCTATCACATTTCTTGATTGTTTGGTTAGAAATTTTTTGAAGCCCATTGAAGGAATGCCTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGGATTCAAGTTGATCTCTTGGAGTTCCATAAGATTTTAAGGTGCACTTGCTGTAACAAGAGTGGCAATGCCCTATTGCCATCCAGACATGATTCCTCAATTATGTATTCCCTGGCTCAAGAACATGGAGATCTTATCAATCTTCATGACTGGTTCCAATCTTTTAGAACCATTGTTCTTCAACATACAAATAAACGGAAACAAAAATCAAAGCAGCCCCCGTTACCAAAGAAGAGAAAAGACATGAATGGATCTGGAGACCAAAATGAAGCATCAATTCAGTATCCTTTATATTTTCCATTTTACGGAGTATCTTTGATAGCAGGAG 2167 0.4038 MAPSSLSIADSQSPSTAPEVAESDLQPFFVLHKASSRRKDRTSTEKGKLRKRDELSSSSPPQSAKKLAGRTTEECDCHLFQQLKIETFEIVWTKIESTIKDVLRDLNASVFNDIQQWVLECFNATRLLGEPSIAEATRSFPVLNDTTPGQLFTALVITRNMEFVDDIWTFEELGDYLKSHGCHVAMLSSPEFSLKNGIAGCLKALLRELLGGAIDSADISILASWYREQDNYNKPLVLIINDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTMDTPRNILPSYALGHLCPSMFMLRTPAERMDAIVEAVLVKHCTTFSIGHKVALFLRNYFINQDGTVTSFIRALKVACLLYFSMEPLSLIHGQILAEDQKEGKSTLSPETMLKYMDELPFYARNQMVDQTRKSMAEGLSELVTVQKLWSTVVLCLYEAGKYSRVRLLDLFCEALDQDLYPSRDSGYHVGDEKDHGLSMTNDPCQQYSIMQSGGFVCQIVRKVRDLPTGMLYQLIESWEKLIADIPEIHQKLEMLQSSVRCEDGKSSRKSSKDISKRYSSRVSVNIDKDSRGLNSQAITFLDCLVRNFLKPIEGMPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCTCCNKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQHTNKRKQKSKQPPLPKKRKDMNGSGDQNEASIQYPLYFPFYGVSLIAG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00065 722 MobiDBLite consensus disorder prediction 1 69 - -
Sebi162g00065 722 Pfam Origin recognition complex winged helix C-terminal 612 691 IPR040855 -
Sebi162g00065 722 CDD Orc3 86 365 - -
Sebi162g00065 722 MobiDBLite consensus disorder prediction 1 20 - -
Sebi162g00065 722 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 81 210 IPR045667 -
Sebi162g00065 722 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 232 364 IPR045667 -
Sebi162g00065 722 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 22 707 IPR020795 GO:0003677|GO:0005664|GO:0006260
Sebi162g00065 722 MobiDBLite consensus disorder prediction 676 702 - -
Sebi162g00065 722 MobiDBLite consensus disorder prediction 33 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00065 Sebi-Chr162 1605391 1617869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi162g00065 1 710 Core DNA Replication Machinery Family AT5G16690 45.556 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00065 K02605 - gmx:100780646 1129.39