Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00056 ATGAGACTCGAATCAGGGACTTGTAACGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTTTCATGGGGTCAAAGGCTGAAGAATACTCTGATGAAAACTGTCGCTCAGGGGAGGCTAATCAGTATTCTACAGATGAGGGTGATGGATCTTCTCTTAGGAGCAGAGCTTGTGAGAGATCGAAGCATGCTGTCAGTGAAACCAGTAATATGCCTAGTGTTTATTCCAGTCATGATGATTCTCTATCTGAAAATGCCGAGAGTAAACAGGCCTTATCAGAAAAGTATCAGGATTCCAAGTGTTTAGAAGGTCTTGATGATAGCACTTCTTGTATCAGTAGAGCCAGCAAAGCTAATTTAGAGAGTGGTAACCATCAAATAAATTCAGACAGAATAAATATATCTTGTAGTTCAGCTTCAGCTAGTCACTTAGGGGCGGAAGGATCTAGAATTGGGCCATCTGTTGACATGTCAGGCTCATCTGAGATTCTCTCTTCTAAAGATGCAGATATTGTGGAAAACTTGTCAGAATGTTGTATGGAAAACGTTGAATCAGCATTGACCAAAGAGGGAGAACCTATTATTGTTACTGGTGAAAAATCTCCTGCAGATAACGATATATCCAAAATACATCCAAAGTCAGAAGCAGATACTGACAATGATGTTGGCGGTGCTAAAGATGAGGATCATAAATATTCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAGCTGGTCAAATCACCTAGCATGCCTGTACCTCAATCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATTCTGGTCGTGATGATCTACTTGCCTTCTGTTGTAGGTGCAGTGATGGCGCAGAGCACACCTACTGCATGCGGGTAATGCTTGATAAGGTTCCTGAAGGGGACTGGTTATGTGAAGAATGCCAATATGCAGAAGAGACAGCAAATCAAAGGCTGGATGTTGAAGGAAAAAAAAGTCATAAAGTTAGTTCCACTTCGCAAATATCTGGAAAAAGGCCTTCTGAAAGCGTGGAAGTAGCTACAGCATCAAAAAGGCAAGCTCTTGAATCCAGCTCAGGATCACCCAAGGCATCAAGCCCCAAGAGAATAGTTCCACTGTCACGAGAATCTTCATCCAAGAGCTTAGATAATGGAAAAGTTAAACCTGGTCAACAGATCCCCATTCGTAATCGCCCTGGTGGTGATGGCGTAGAACTAGCTCGTTCTCTTTCCACTGGCCCTCGGAGTCAAACTGCAAGGGGTGCGTTGTTGAAGTCTAATTCATTCAACAGCTTCAATTCCAAGCCAAGAGTCAAACATGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTTGAGCATATTTCTAAGAATATGGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATCCTCAAATTTAGGCCGTGCTACTGAATCAAAAGTTAAAATGCTTTCTCCCAAGTCTGTAACTGCTCAGGATTTGAAAGGATCTAGACATGCAAAAGAATCAGGTGTATCTGACAGGAAATTCCTGTCTAGGATTGATCGGCCTGTCATTTGTTCAACCATGGCTAGTTCTGTTGTTTCTCCTAAGGGTGATCAGAAGCTCACACCTCGTGGTGAAACTGCTAAACCTTCAGCAGTTAACAACAATCGAGAGCCTAAGGTCAACCAAGATGGAAAATTAAGTTCATTATCAAAGTCTATGAACAATATAAGCCATAAAAGTCCGGAACCTCAGGTTATTTCAGAGAGAACGTCAACCAGTGTGTATGAAACTAAACAAGATGGGCTGCCTCGAGCACGAGAGACAGCAAATCAGGTTGACAAAACAAAAGATAGTTCTATTGATCGTGTGAGGTCAAGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCATAAATGTAAAGATTTTGGCCACCCTACAGAATGTTGCACAATTGGTGGTACACAGGAATCTGGTGCTGAAGTATCAGTCACTGCCACAATTAGTTCAAAAGTGGAGATGCACACAGGTAATAAATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGACCTGAACTACACAAGAAGAAAGACGTGCCTGATCAAACTGATGAGTTTCCTACATCAGGCACAGACATGAAATCTGCAGTCAGTTCTCAAGACCAAGTGTTGGTTTCCTACACATCAAAAAATAGTATATCTGCTGAAGAAACCAATGCAAGGCAGGAAATCCTTGAGAATTCTACGTTTGAAACTTGCAAACATTCATCTGGCAATGATTTGAAGCATAACTTTTGTCCAACTGATTTTTCTTTTAAACTTAGAAAGTCAGATTCTGAGGTTCCTGCTTCTGGAAAGCTTGGGGTGAGAGACTTGCCTCATTGTGCTTCGGCAATCTCAAGTGTTATTTCAAAGATGTCAGCCATTCCAGAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAGTGGAAAGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCCTCATGTGCTTCCCCTAAGGTTCTTGACGCAGTGAGCAAGTTTTTGCCTCAAGTTTCCCTACACGAAGTTTCTCGCTTGAGCACATGGCCTTCACAATTTCATCAGGGTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTCGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGCGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGGATGTTTGATGGTGTTGAGCTTCTCATATTCACATCCAATCAGCTTCCTGAAAATTTACAGCGTTGGAACATGTTGTTTTTCTTATGGGGCATATTTAGAGGGAGGAGGATTAATCATTCAGATTCTGAAAAAAAAAATTGTATTCCCAGTTTGAATGTGATACCAAATGAGAAGGATTTTCCAACAGCTGTCATGACTTTGTCTGAAACTCTCTGTTCACCAAAGCGCATGGATGAAGAATCAATTGCTTCGGGTAAAGCTTGCAGTGCAGTTAATCCATCCACTTCCATTGACCAAGGTCATATTATGGTAAGTAGGAATTTTGATATGAAAGAAACTATTTTTGACCAGACACATTTGGGTTCACAAGTAAACTTAGAGAGGCAAGATAGTAGAATCGACACCAAATCTATGTCAAGGATTCCGACAAGCAGTGCACAATTGTGTCAAGAGATGAATTCCACTGGTTCATCCCTGAAAGGTAGTGAATCAGAGCATGGACAATACAGTGTGTGTAAACCTCCTGAAGCAATGGGAACAAGTGTACGTAGTACGATTGAGGAATCAAAAACTGATTATGATATTTCTGTTGAGCAAGAGAACTCCATGTCTTCAAGGATTCCTTATGTTGGCACTCAAGAGATAAGCACTGCAAACAGTATCAGTAAGGATGAAATTTCGGAGAGAACAAACAATGATGAAAATCAACGAAGGCCTAAAAGGAAACAGATAGAAGATGATCTCAATATTAATGTGGAGGCAGCATTTCAGGGAGACCTGACCATAAAAGGGGTAAACTGTCAACTACCTAATGATAAAAAAGTTAAGAATACAGATCTTTCAGGTAAAGTTATGGAGGCTGCTATAGTTAGTTGTCAGAAAACGCCTTGGAACAAGGTCTATGGTAAATTGGGCGACAGTGAAAGTTCTAGCAAGCTGCAGACAGGTTTCAGTGGAGTGTATGGATGTTATAGTTCTGGAGCAAAGGATTCTTATAATGGCAGTTTTGCATCACTCGTAAATGATTTTGGTTCCTGTTCTTCAGTTGAGGACAAAGGATGCAAGGAAGCTTGTGACGAGAAAATCATCCATGAGGACCTTGGAACAATGGAAAGAACCTTCTTTCCTGTTGATGCACATAATAAAAATGACTCACAACTGGTGCTGAATAGCATGTCACTGAAAGGGCCTAATGAGTACCGGGACCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGTGAAGCGAAACAGTCACAGAAGGGTATGCTGCCTTTCTTTGTTGGGGCAGATGACAAGAAAAATAACCAGGAAAAGACTCCAGATTTGTTGGAAGATGAGCAAGAGGATGACAGTGTTGCTGCATCTCTTTCCCTGTCTCTATCCTTCCCATCTTCAAACATGGAACACACAAAACCTGCTTCAAAAGCTGAGCATTTGCCTGATGGGCATCATGTTAATACTTCGTTGCTTCTTTTTGGGAGATTCACTGACAAATAA 4296 0.4125 MRLESGTCNVCSAPCSSCMHLNRAFMGSKAEEYSDENCRSGEANQYSTDEGDGSSLRSRACERSKHAVSETSNMPSVYSSHDDSLSENAESKQALSEKYQDSKCLEGLDDSTSCISRASKANLESGNHQINSDRINISCSSASASHLGAEGSRIGPSVDMSGSSEILSSKDADIVENLSECCMENVESALTKEGEPIIVTGEKSPADNDISKIHPKSEADTDNDVGGAKDEDHKYSAHDGLHEKAEELVKSPSMPVPQSEDESDESDVVEHDVKVCDICGDSGRDDLLAFCCRCSDGAEHTYCMRVMLDKVPEGDWLCEECQYAEETANQRLDVEGKKSHKVSSTSQISGKRPSESVEVATASKRQALESSSGSPKASSPKRIVPLSRESSSKSLDNGKVKPGQQIPIRNRPGGDGVELARSLSTGPRSQTARGALLKSNSFNSFNSKPRVKHVDEVVPQKQKGGVEHISKNMETPAGMISKSMSFKSSNLGRATESKVKMLSPKSVTAQDLKGSRHAKESGVSDRKFLSRIDRPVICSTMASSVVSPKGDQKLTPRGETAKPSAVNNNREPKVNQDGKLSSLSKSMNNISHKSPEPQVISERTSTSVYETKQDGLPRARETANQVDKTKDSSIDRVRSSVTNASKSSFCHKCKDFGHPTECCTIGGTQESGAEVSVTATISSKVEMHTGNKLKAAIQAALLRRPELHKKKDVPDQTDEFPTSGTDMKSAVSSQDQVLVSYTSKNSISAEETNARQEILENSTFETCKHSSGNDLKHNFCPTDFSFKLRKSDSEVPASGKLGVRDLPHCASAISSVISKMSAIPEYEYIWQGVFEVHRSGKPPDLYTGIQAHLSSCASPKVLDAVSKFLPQVSLHEVSRLSTWPSQFHQGGAKEDNIALYFFAKDIESYERHYKRLLDHMIRNDLALKGMFDGVELLIFTSNQLPENLQRWNMLFFLWGIFRGRRINHSDSEKKNCIPSLNVIPNEKDFPTAVMTLSETLCSPKRMDEESIASGKACSAVNPSTSIDQGHIMVSRNFDMKETIFDQTHLGSQVNLERQDSRIDTKSMSRIPTSSAQLCQEMNSTGSSLKGSESEHGQYSVCKPPEAMGTSVRSTIEESKTDYDISVEQENSMSSRIPYVGTQEISTANSISKDEISERTNNDENQRRPKRKQIEDDLNINVEAAFQGDLTIKGVNCQLPNDKKVKNTDLSGKVMEAAIVSCQKTPWNKVYGKLGDSESSSKLQTGFSGVYGCYSSGAKDSYNGSFASLVNDFGSCSSVEDKGCKEACDEKIIHEDLGTMERTFFPVDAHNKNDSQLVLNSMSLKGPNEYRDQFQVGIPNLELALGGEAKQSQKGMLPFFVGADDKKNNQEKTPDLLEDEQEDDSVAASLSLSLSFPSSNMEHTKPASKAEHLPDGHHVNTSLLLFGRFTDK 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 39 54 - -
Sebi162g00056 1431 SUPERFAMILY FYVE/PHD zinc finger 262 326 IPR011011 -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 333 417 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 201 239 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 67 92 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 1394 1414 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 64 92 - -
Sebi162g00056 1431 SMART PHD_3 275 322 IPR001965 -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 1141 1170 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 207 239 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 38 57 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 502 525 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 707 731 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 1155 1170 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 614 635 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 341 399 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 248 267 - -
Sebi162g00056 1431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 335 IPR013083 -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 561 612 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 1083 1105 - -
Sebi162g00056 1431 MobiDBLite consensus disorder prediction 543 639 - -
Sebi162g00056 1431 PANTHER - 273 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00056 Sebi-Chr162 1361052 1367553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi162g00056 272 333 C2H2 Transcription Factor Family AT3G01460 37.097 4.05e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00056 - - gmx:100784908 2013.81