Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00045 ATGGTTCATGTACCATTTCCCCACGACTTTTACCATCCAAGGCAGAATCTGTTAGGGAATAGGATAGAGCTTGTTGATCAATCTGATCATCGTTTTACCATTCGCCTGCTTTTTGGTAGCAAGTCTGTGGTGATGTGGGAATTTGCTGAACATTTGAAGCGATTTTATAATTTTGATAAGACTGTGTACTTGTACCTTAAATATGAGGGTGGTATAAGATTCAGCTTTGAGATTAGGGATGAGGACTCAATTGAAACTTTGACCCCTGCCTTAGTTCATCGAAGTGGAAGAATTGGTGTTATTAATCCTGTCATAGTTCAGGTTATTTCTGGATCAAATGTCAATGATTCTGACAGTAATAAAAATGGTGGAGGTGGTATTGAGAATCAATCTAGACATGTAAATTTTGATGCTGGAAGGAGGGTTATGAATTTTCATAATCAAACTGGCCCTGTCAATGAGCATGTTGCTAAGAGGGTTATTAGTTTTGAGAAAGTTATAACAAAGAGTCAATCAAAGGCTGGACAGCCTCTGCCCTTACCACGGAAATTTGTGCAAGAATTTATCAGAAAAAACTGGACAGAGCTAAGTCTACAGGTTGGAGATGGTCGATTCTACAACTGTAGTTTGCTGAGGAGAAAAGGAAGCGAAAAAGATTGCCACCTTGGCAAACCTTGGTACAAATTAGTCTCTGATATGAGACTGAGAAAAGGAGACAAAGTTGTTTTCAAGACGATTTTCAAAGGCTTAAACAGTGTCAATGTGAAGATAATTCGGAAGGGCAATTAG 789 0.3866 MVHVPFPHDFYHPRQNLLGNRIELVDQSDHRFTIRLLFGSKSVVMWEFAEHLKRFYNFDKTVYLYLKYEGGIRFSFEIRDEDSIETLTPALVHRSGRIGVINPVIVQVISGSNVNDSDSNKNGGGGIENQSRHVNFDAGRRVMNFHNQTGPVNEHVAKRVISFEKVITKSQSKAGQPLPLPRKFVQEFIRKNWTELSLQVGDGRFYNCSLLRRKGSEKDCHLGKPWYKLVSDMRLRKGDKVVFKTIFKGLNSVNVKIIRKGN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00045 262 SUPERFAMILY DNA-binding pseudobarrel domain 160 254 IPR015300 -
Sebi162g00045 262 ProSiteProfiles B3 DNA-binding domain profile. 163 261 IPR003340 GO:0003677
Sebi162g00045 262 SMART B3_2 163 261 IPR003340 GO:0003677
Sebi162g00045 262 Pfam B3 DNA binding domain 163 260 IPR003340 GO:0003677
Sebi162g00045 262 Gene3D - 149 261 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00045 Sebi-Chr162 1197704 1198706 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi162g00045 B3 9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00045 - K20190 lja:Lj0g3v0086279.1 108.997