Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00044 ATGTCTATGTTCGAAGAAAATGAGACATCTATGGGTTTGGACGATATAACCTCTCAACAGGGTGATGATTATGACGGTAGTCGAGGTCCATGTGATGATGCTATTGGGTTTGACGAAGGTGAAGAATTCTTAAGTGAAGAAAGTGTGCAAAATGATTGTTTTGAAGATGTTATTATGATAGATGATTTTAATGATATTAAGAAGATTGATATGAAAAATATCAGTGAAGATGATCTTCGTAAATATGATTTTGCCGATCTAGATGTGGCCCACAAATTCTACATATGGTATGGTCGGTCGAATGGGTTCTCTGTTCGTAAAAGCAATGTAGTATCGAACAGTAAGGGTGACATTTTGCAGCAAACATTTGTTTGTTCTGCACAAGGACATGGAAGGGCTAGGCGTTCCACAAGAAGTTCTAAAAAGAGACAATCGAAACTGCTAATGAGGTTTGATTGTAAAGCAATGTTTCGTGTTCACATCAACGTTAACTCAGGCCGATGGTATGTCACGATATTTGATGATAGTCACAATCGCAAATTGTTGGAAGAACAACATTGTGGTATGTTACCAGCATATAGAAAGAGGACAGAATCTGACATTATGCAGATTAACAATTTCAGAGAAGTTGGGATAAGACCCCCTCATATCTATGGTTCATTTGCTAGGCATGGTGTTCTGGAGTATCTTCGAAAGTTGCGGTTGAAAGACAATTTGATGTTCTACAAACACATAGCAGACGAGGATGGGAGACTCCGACACCTATTCTGGTGTGATGGGGAAAGCCAAATGAACTACCAAGTTTTTGGTGATGTGTTAGCCTTTGATGCTACTTATCGCAAGAACAAGTACATGTGTCATGTAGTGATCTTCTCTGGCGTTAATAACCATAATCAGACCATTGTATTTGCAAGTGCTATTGTATCTGATGAGACAGAACAAACATATGTTTGGTTGCTGGAACAACTTGCACAAGTAATGAAAGGTAAGGCACCATCATCAGTAATAACCGACGGTGATTTGGCATTGAGGAACGCAATAAGGAAAGTATTTCCTAATGCGCACCACAGGTTATGTGCTTGGCATTTGCTTCGCAATGCAACAAGTAATGTTGGAATTCCCGATTTCATGACTTATTTCAAGAGGTGCAAGTTTATACACTCGAGGATTAATTTGACCGAGTTTATGCAGCAGTTTCATCGATTCCTAACCTACTTTCGTTTCAGAGAAGTGGAAGCTGACTTTAGATTTGTGCATGGTGAGCCAGTGTTGCAAACAAATTTTCATACCCTTGAGAGGTGGACAAAGAGTGTGAAGGCTTCTATTCATGGGACTTACATTGATGGTTCATGCTCAACATCCACTATATCTCTTGCAGTTAAGTATCGCTTGCAACCCATCTTGTCTGCGTGTTCAAGAACTAACTTCACTCGTTCCAAAGGAGCCAATATGGATGGATTAGTGTATTCAGGTGCAAGAACATTCAGAAGATTTGCTCCATTTGATGGTATCAGAGCTCCATTGGAGCTTGCTGCACTGCTCTCACCATGCCAAAGAACACTAGTTCATCAACCCAAAACACCTTTTTCCTCTCTCAATCAAACTGGAACTCCTGTTTCTGGAACTCTTGATCCAAATAGAAAGCAGAGGCCATTAACTAAAATCATAAACAACACTGTCTTTCTCTTTTTCTTGACTGTATATTAG 1707 0.396 MSMFEENETSMGLDDITSQQGDDYDGSRGPCDDAIGFDEGEEFLSEESVQNDCFEDVIMIDDFNDIKKIDMKNISEDDLRKYDFADLDVAHKFYIWYGRSNGFSVRKSNVVSNSKGDILQQTFVCSAQGHGRARRSTRSSKKRQSKLLMRFDCKAMFRVHINVNSGRWYVTIFDDSHNRKLLEEQHCGMLPAYRKRTESDIMQINNFREVGIRPPHIYGSFARHGVLEYLRKLRLKDNLMFYKHIADEDGRLRHLFWCDGESQMNYQVFGDVLAFDATYRKNKYMCHVVIFSGVNNHNQTIVFASAIVSDETEQTYVWLLEQLAQVMKGKAPSSVITDGDLALRNAIRKVFPNAHHRLCAWHLLRNATSNVGIPDFMTYFKRCKFIHSRINLTEFMQQFHRFLTYFRFREVEADFRFVHGEPVLQTNFHTLERWTKSVKASIHGTYIDGSCSTSTISLAVKYRLQPILSACSRTNFTRSKGANMDGLVYSGARTFRRFAPFDGIRAPLELAALLSPCQRTLVHQPKTPFSSLNQTGTPVSGTLDPNRKQRPLTKIINNTVFLFFLTVY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00044 568 Pfam MULE transposase domain 272 366 IPR018289 -
Sebi162g00044 568 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 383 IPR031052 GO:0006355
Sebi162g00044 568 MobiDBLite consensus disorder prediction 1 27 - -
Sebi162g00044 568 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Sebi162g00044 568 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00044 Sebi-Chr162 1128696 1131190 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi162g00044 MULE 1.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00044 - - tpra:123884554 377.096