Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00043 ATGGCTGCTGCTGACAACACCAACCCAAAGGATTATTACAAAGTGCTGGAGGTTGATTATGACGCAACAGATGAAAATATCAGATTAAGTTACCGAAGACTTGCACTGAAATGGCATCCTGACAAGCACAAGGGTGACAGCGATGTTACTGCAAAATTTCAAGAGATTAATGAAGCTTACAATGTATTGAGTGATCCTGCCAAGCGTTTGGACTATGATTTAACTGGGATATGTGAGATTGACAAGTATAGCTTGCAGGTCACAACAATTGATTGA 276 0.4022 MAAADNTNPKDYYKVLEVDYDATDENIRLSYRRLALKWHPDKHKGDSDVTAKFQEINEAYNVLSDPAKRLDYDLTGICEIDKYSLQVTTID 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00043 91 FunFam Chaperone protein DNAj, putative 3 88 - -
Sebi162g00043 91 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Sebi162g00043 91 PRINTS DnaJ domain signature 48 68 IPR001623 -
Sebi162g00043 91 PRINTS DnaJ domain signature 31 46 IPR001623 -
Sebi162g00043 91 PRINTS DnaJ domain signature 13 31 IPR001623 -
Sebi162g00043 91 Pfam DnaJ domain 11 73 IPR001623 -
Sebi162g00043 91 SMART dnaj_3 10 68 IPR001623 -
Sebi162g00043 91 SUPERFAMILY Chaperone J-domain 8 78 IPR036869 -
Sebi162g00043 91 CDD DnaJ 11 65 IPR001623 -
Sebi162g00043 91 Gene3D DnaJ domain 1 88 IPR036869 -
Sebi162g00043 91 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Sebi162g00043 91 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00043 Sebi-Chr162 1122160 1126432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi162g00043 1 73 C2H2 Transcription Factor Family AT1G74250 42.308 5.71e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00043 - - gsj:114380558 166.392