Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00041 ATGGATTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGATGTAAGTTATAGTGACTCTTCTAGCAATCATGAAATGAGTAGTGGAAATGATATACATAGTGATGAGGGAAATGTGTCTATTCAAGCAGAGGCTGATATGGATGAGGAGAATGATGTTATGGATAGAGATGTTAGAGACGATGTGTCAAGGAGGATAATTGACTTGACAAGTGATGATATAAGGGCTTTGGAGATCGCTAGTGAAGAACATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTACTTCGAGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGTATTTGATTAGGTTAGATCGGAAAAAGGAACACAGACCTCTTACGCGTACCAATTGTCAAGCTAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCACTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCGTAATTATCGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTATTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAGCGTGATGTCAAGTATGAGATTGAAAGGGCAGGTGGTTTAAATGTAATTGAGCGTTCACTTGATGGGGTTAATGTTGTTTTCAAATTAAATGAATATTGTAAGCCTCGTAGTGAACGCTTTGTTGTTTATGATAAAGAGAATTCTAAATTTGTTTGTGATTGTCGGTTGTTTGAATCTTGTGGCATTCCATGTCGACATATTTTTTGTTCTATGAGACTGGAGCACATAGATGCTATACCCCCATGTATGATTTGCAAACGGTGGAGGAAGGATGTTAAGAGTGACTTGATGATATCGGATGGTTTGGATGAGGTAGAACCTGACATGATGAGGGTTTGTCGTGTTGTGGTTGCTAGCTCTCATTGTAACAGTCTTTGTGATATGGTTTCCCAAAAGCGTGAGCATTTTAAGGAGTTTTTAAATGACATTATGAAGTTGAAACAGAAGTATGAGAGATTGTGTTCCACTAGTAGCACATCTAATGTTGAGGTAAATGTTGTACAAAATCCCACTGTTGTGGAGACGAAAGGGGCTCCTATGAAGACAAGGAAGAGGTGTAAGAGTAAGAGGTGTTCAAACTGTAACATTTCTGGACATGTTATCACTACCTGTCCTAGGTTGTTTCCACCACCAGAAGATGATGAAGTCAACATTAATGACGAAGAGCATGGTCCTGGGTCACAAACTCTTAGGAGTGATGCTGCCCAAAATCATGATGGAATTTCATCAGATGAAAACTTCCCTGACAGTAGCTCTAATCACGTGTCTGGAAGCAATAGTCATACTCAGAGTGAAAAAGAAGATGAAGTCCCTTTCACAGATTTCATACATGAACTTAAACCTAGTCCCACTGAATCCAATGTAAATGAAGTGTTGAATGGTCCCCATAGAGTTGGGGGAGATACTGCAGGTCCATCATCCACAGCAAACTACCAGTTACCAATTGTGGGACCTTCTTCTGTTGGAAACATACAAATACGTGAGGGTATGTCCATTACGTTACCTTTTCCAAATCCATCCCATGTTCCTGTATTACCAAGTCAATGGAGATCTATGCATCATGGCTTATTTCCTTTGTTCCCAAATCAATCAACAATTGGTCTCAATTCTCAACAGTCCACAGAACTGAAGATGCTAGTCGGCCTGGAGTTTGGAATGATCTACTGCAAGAAGTAA 1908 0.3926 MDFNSDDSAVNLDDDRDVSYSDSSSNHEMSSGNDIHSDEGNVSIQAEADMDEENDVMDRDVRDDVSRRIIDLTSDDIRALEIASEEHAFNFYFSYAKCKGFAMRKDDVLRDKKGMVIMRQYLCSRAGMRDKKYLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKWKVVSLEESHNHDLTPAKFVPLIRNYRGLTDGDKAQVDALHSHGIRPCQIMGFIVDQKGGYRNVGFSKKDLYNYIDEVKRDVKYEIERAGGLNVIERSLDGVNVVFKLNEYCKPRSERFVVYDKENSKFVCDCRLFESCGIPCRHIFCSMRLEHIDAIPPCMICKRWRKDVKSDLMISDGLDEVEPDMMRVCRVVVASSHCNSLCDMVSQKREHFKEFLNDIMKLKQKYERLCSTSSTSNVEVNVVQNPTVVETKGAPMKTRKRCKSKRCSNCNISGHVITTCPRLFPPPEDDEVNINDEEHGPGSQTLRSDAAQNHDGISSDENFPDSSSNHVSGSNSHTQSEKEDEVPFTDFIHELKPSPTESNVNEVLNGPHRVGGDTAGPSSTANYQLPIVGPSSVGNIQIREGMSITLPFPNPSHVPVLPSQWRSMHHGLFPLFPNQSTIGLNSQQSTELKMLVGLEFGMIYCKK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00041 635 SMART 26again6 294 321 IPR006564 GO:0008270
Sebi162g00041 635 MobiDBLite consensus disorder prediction 449 513 - -
Sebi162g00041 635 MobiDBLite consensus disorder prediction 466 504 - -
Sebi162g00041 635 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
Sebi162g00041 635 PANTHER OS01G0519700 PROTEIN 283 430 - -
Sebi162g00041 635 ProSiteProfiles Zinc finger SWIM-type profile. 284 319 IPR007527 GO:0008270
Sebi162g00041 635 MobiDBLite consensus disorder prediction 23 40 - -
Sebi162g00041 635 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00041 Sebi-Chr162 1072885 1076229 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi162g00041 FAR1 1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00041 - - ccaj:109794460 241.891