Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00006 ATGGATGCCCAAAAGAATCATCAAAATGTTGTGACCGTAGATGTCCATGCTGCCAAAGATTTGCTCAATTCATCTGGTTATTGTTATCTAGATGTGAGGACAGTTAAGGAATTCAGCAATAGCCATGTTGAGAATGCTCATAATGTCCCCTATATGGTCATCACGGAAGCAGGATGGGTGAAAAATCCTGATTTTGTTTGCCAGGTAGCAGCAATATGCAAGAAAGAGGATCACTTAATTGTGGGTTGCTATAGTGGAGGAAGATCATTCCGAGCCTGCGTTGATCTGCTTGATTCAGGATTTAAGCATGTTGTTAACATGGGGGGAGGCTACTCTGCATGGATGGAGGATGCTGAATTTGTTGGTGGGAACAAGCAAGCAGAAGAGCAAAAAACAAGTTGCAAGTTCCGTCTTTAA 417 0.4245 MDAQKNHQNVVTVDVHAAKDLLNSSGYCYLDVRTVKEFSNSHVENAHNVPYMVITEAGWVKNPDFVCQVAAICKKEDHLIVGCYSGGRSFRACVDLLDSGFKHVVNMGGGYSAWMEDAEFVGGNKQAEEQKTSCKFRL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00006 138 CDD RHOD 18 114 - -
Sebi162g00006 138 Gene3D - 1 119 IPR036873 -
Sebi162g00006 138 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 117 IPR036873 -
Sebi162g00006 138 Pfam Rhodanese-like domain 18 116 IPR001763 -
Sebi162g00006 138 SMART rhod_4 13 120 IPR001763 -
Sebi162g00006 138 ProSiteProfiles Rhodanese domain profile. 23 119 IPR001763 -
Sebi162g00006 138 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 126 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00006 Sebi-Chr162 204486 205441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi162g00006 8 116 Sulfurtransferasese or Rhodanese AT5G66170 48.649 2.04e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00006 K22547 - gmx:100794624 215.698