Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi162g00004 ATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAAGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAACTAAAGACAGAGCGTCTTGGACTCAGGAATAGAATTGAAAAGAAAGCAGCCTATCTGCAGGAGCTTGAGGAGCAAACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTTCATTTTGATTTCAATAGTACTCCCTTTGAGCTGCATGATGACAATTATGTTCTCAAGGCAATGAAATTTTGTGAGAGACCACAGAGTGATAATATGACACACAATCCTACTGATGGAGGGGAAGGTTCTAGCATGTCAGGATTGTATCAACCGCAGGTTCCTCCTTCAGGTTCAAACATGTCAGTTCGGCCTCCCACATCACCTCCCCTCCCTGGAATATTAAAGGCAAGAGTTAAGCAAGAGCATTGA 456 0.4123 MDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKAAYLQELEEQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQSDNMTHNPTDGGEGSSMSGLYQPQVPPSGSNMSVRPPTSPPLPGILKARVKQEH 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi162g00004 151 MobiDBLite consensus disorder prediction 97 129 - -
Sebi162g00004 151 SMART DP_2 22 149 IPR014889 -
Sebi162g00004 151 MobiDBLite consensus disorder prediction 96 151 - -
Sebi162g00004 151 PANTHER TRANSCRIPTION FACTOR DP 51 123 IPR015648 GO:0005667|GO:0051726
Sebi162g00004 151 Coils Coil 31 51 - -
Sebi162g00004 151 Pfam Transcription factor DP 51 105 IPR014889 -
Sebi162g00004 151 SUPERFAMILY E2F-DP heterodimerization region 21 105 IPR037241 -
Sebi162g00004 151 CDD DP_DD 20 90 IPR014889 -
Sebi162g00004 151 Gene3D Transcription factor DP 53 111 IPR038168 -
Sebi162g00004 151 Gene3D Transcription factor DP 19 52 IPR038168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi162g00004 Sebi-Chr162 126488 128159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi162g00004 1 100 E2F-DP Transcription Factor Family AT5G02470 45.113 8.39e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi162g00004 K04683 - cave:132186448 260.766