Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00107 ATGGAAATGAGAGGCCAAGAAAAGGAATTAGAGATGGCAACTACTTTGGGTTATAATCTTCCCAATAGGGATTCTTCATCTTCTTCCAAGCTGTCTTCTGGGCAGAGAGGTGCTAGTAGTGATCAACCTCCTCAACCTCACAGTACTCACACATTAATCTTCAATGATCCACCTCAAACTTCACATCACCAACACCATCATCATCTTTTTCCACCTACTCCTCTTGCACCCCCTCAACATCACCAATCTCAGAGACCAAGGGAACAACCCCAATTACATAATGTTCCCAATTATCACAGTCACAGCTATTATCCCAATCCCAATAAGCATAATAATGGTCACCTTCAGTTTCCTACACCACCATCCTCTTCTCTTTCTCTACATCACCATAGATTTTCCCATGTGGTTGCTACCCCAACAGCAGGTCCTGTTCCACCCTTGATGATGGCCTTTGGAGGCCCTGCTGAGTCCTCAAGTGAAGATCTAAACATGTTCCAGTGTAACGCGGGAGCACAGTTTTCAGTGCAGGTGCCACCACTTTCCAAGAAGAGGTTCAGGACAAAGTTCTCACAGCAGCAGAAGGATAGGATGATGGAGTTTGCTGAGAAGCTGGGGTGGAAGATCCAGAAACATGATGAACAGGAAGTGCAGCAATTTTGTTCCCAAGTGGGTATCAAGAAACAGGTTTTCAAGGTTTGGATGCACAATAACAAACAAGCAATGAAGAAGCAGCAAAATGTAAGCCTATAG 750 0.4453 MEMRGQEKELEMATTLGYNLPNRDSSSSSKLSSGQRGASSDQPPQPHSTHTLIFNDPPQTSHHQHHHHLFPPTPLAPPQHHQSQRPREQPQLHNVPNYHSHSYYPNPNKHNNGHLQFPTPPSSSLSLHHHRFSHVVATPTAGPVPPLMMAFGGPAESSSEDLNMFQCNAGAQFSVQVPPLSKKRFRTKFSQQQKDRMMEFAEKLGWKIQKHDEQEVQQFCSQVGIKKQVFKVWMHNNKQAMKKQQNVSL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00107 249 ProSiteProfiles 'Homeobox' domain profile. 180 244 IPR001356 GO:0003677
Sebi161g00107 249 SUPERFAMILY Homeodomain-like 175 243 IPR009057 -
Sebi161g00107 249 MobiDBLite consensus disorder prediction 18 59 - -
Sebi161g00107 249 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 114 240 - -
Sebi161g00107 249 FunFam Zinc-finger homeodomain protein 2 170 243 - -
Sebi161g00107 249 NCBIfam homeobox domain, ZF-HD class 182 239 IPR006455 -
Sebi161g00107 249 Gene3D - 172 243 - -
Sebi161g00107 249 MobiDBLite consensus disorder prediction 1 126 - -
Sebi161g00107 249 MobiDBLite consensus disorder prediction 80 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00107 Sebi-Chr161 1560620 1561621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00107 144 244 ZF-HD Transcription Factor Family AT2G18350 55.963 5.09e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00107 - - vra:106776405 205.297