Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00072 ATGGGAACTGGAGAAGAAAGCACAACTAAACCTTCTAAACCATCTTCAACTTCTGCGGCTCAGATACCACTGGCACCTTCATATCCTGACTGGTCAAGCTCCATGCAGCATCCTCTCATTCCACCATACGGTACTCCTGTTCCATATCCAGCTATATATCCTCCCGGGAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCAAGCACCACACAGCCTGGCACAGAATTTGTAGGCAAGGGTCCTGATGGAAAAGATCGGGTTTCTCCCAAAAATTCAAAGGGAGTATCTGCAAATACTGGTTCTAAAGCAGGAGACAATGGAAATGCAGGCTCGGCGTCAGGAAATGATGGCATCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGATGATGCTAATGATGAAAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGGAGCTTTGACCAAATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGTTGGTGGCATTGCTCAGTCAACTGTACCTGGAAAGCCTGTTGGGTCAATGTCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCGTCTTCTGGTAGTGCTGAAGCTGCAAAAATGAGGCACAATCCATCTGCTGCTTCAGGAGCTGTTACTCCTTCAACCATAATGGGACGTGAAGTCGCACTTGGTGAACAGTGGATACAAGACGAACGTGAGTTGAAAAGACAGAAGAGGAAACAATCTAATAGAGAGTCAGCTAGGAGGTCAAGACTTCGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGTTGGGAAATGAGAATCAAACTTTAAGAGAAGAGCTGAGGAAAGTATCCGAAGAATGCGAGAAGCTTTCATCTGAAAATAATTCTATCAAGGAAGAGTTGAAACGGTTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAA 963 0.4517 MGTGEESTTKPSKPSSTSAAQIPLAPSYPDWSSSMQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSTTQPGTEFVGKGPDGKDRVSPKNSKGVSANTGSKAGDNGNAGSASGNDGISQSAESGSEGSSDDANDENTNQQESATNKKGSFDQMLVDGANAQNNSVGGIAQSTVPGKPVGSMSATNLNIGMDLWNASSGSAEAAKMRHNPSAASGAVTPSTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGNENQTLREELRKVSEECEKLSSENNSIKEELKRLCGPEAVANLE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00072 320 Pfam G-box binding protein MFMR 36 64 IPR012900 -
Sebi161g00072 320 Coils Coil 251 306 - -
Sebi161g00072 320 FunFam BZIP transcription factor 240 291 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 92 179 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 41 55 - -
Sebi161g00072 320 SMART brlzneu 238 302 IPR004827 GO:0003700|GO:0006355
Sebi161g00072 320 MobiDBLite consensus disorder prediction 1 34 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 240 263 - -
Sebi161g00072 320 Pfam bZIP transcription factor 238 300 IPR004827 GO:0003700|GO:0006355
Sebi161g00072 320 SUPERFAMILY Leucine zipper domain 241 297 IPR046347 GO:0003700|GO:0006355
Sebi161g00072 320 MobiDBLite consensus disorder prediction 62 76 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 295 320 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 1 179 - -
Sebi161g00072 320 CDD bZIP_plant_GBF1 243 293 IPR045314 GO:0003700|GO:0006355
Sebi161g00072 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 245 260 IPR004827 GO:0003700|GO:0006355
Sebi161g00072 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 240 303 IPR004827 GO:0003700|GO:0006355
Sebi161g00072 320 Gene3D - 241 296 - -
Sebi161g00072 320 MobiDBLite consensus disorder prediction 295 311 - -
Sebi161g00072 320 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 315 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00072 Sebi-Chr161 1083564 1086063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00072 1 320 bZIP Transcription Factor Family AT4G36730 47.443 9.86e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi161g00072 bZIP_1 2.5e-20 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00072 K09060 - gmx:100808533 466.848