Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00071 ATGGCACATGAATGTCCACACGTCTTAGACAGAGGCAGTAAGCTCCTCTTCCATCTCTCACTCGCTAATGGGTCCTCATCAGAGGAACCCAGGCTAAGTGACCGCGTTTTCGATGATGGTTTCGTCTTTGATATTGATCGTTCCTTGCTACTCGACCCTCGTAAACTAATCATTGGTGATGTCATTGGAGAAGGCGCTTACTCCATTGTACACACAGGATGGTATGGATGTCGTCCTGTTGCTATAAAGATTATACTCCCAGAAAGAACAGTGAATGCTACACCAGAATGCAAGGCAAAATTTCAGCGGGAGGTGAACTTGATATCTAAGATGCAACATGAAAATATTGTGAAGTTTATTGGCGCCTGTGTGGAACCATCGATGATGATAGTCACAGAACTTTTGGAAAGTGGCTCACTTCAGAAAAATTTAAAGAGCATCTATCCTTGGACTCTTGGTTTGGAACAATCTTTAAGCTTTGCTCTGGATATTTCTCAAGCAATGGAGTATTTGCATGCAAATGGCATTATTCACCGTGATTTGAAGCCTGGTAATTTACTGCTTACAAAGGACAAGATGCATGTTAAACTTGCTGATTTTGGTTTAGCTAGAGAAGATATATGTGATGAGATGACTTGTGAGGCTGGTAGTTACCGATATATGGCTCCTGAGTTATTCAACAAAGATCCACTTCCAAAAGGAACAAAGAAATTCTATGATCGCAAGGCGGATGTCTATAGCTTCGCAATGGTTCTGTGGTCAATAATCAAAAACCAAACTCCATTTAAAGAAAGGAAAGACTTGATGGCTGCATATGCTGCAGTAAACAACTTGAGGCCAAGTGTGGATGAGTTTCCAACACCTGTACTTCCCCTGCTGCAGTCCTGCTGGGCAGAGGACCCAAAACTCCGACCAGAATTCACAGAGATCACTGAAACTCTAGCAGAGCTTCTCCAGAATTTTTGGCCACCAAGGACTACACTTTCCAGCATAACTGAGATTGAAGAAATTGAAAGCAGTGACGATGAAGAAATTCCAAAGGCACATGAATCAAGCCTGGACTCTGGGGAGGAAAACAATATTCCCAAACATCATGATGATGATTATGGGACTAGAAAACCCAATGGTGGAACAGAGAGTGAGTCTCATTCTCAGAGTAGAAGAGCACAGACCCCTTTACCTGCGTCAACCGAAGGCAAGCCAAAAAAGAAAAGCAAGTTCAGGTTTTTATTGTCGTGTTTCCGCAGTTGCCATGCCTTTTGA 1263 0.4268 MAHECPHVLDRGSKLLFHLSLANGSSSEEPRLSDRVFDDGFVFDIDRSLLLDPRKLIIGDVIGEGAYSIVHTGWYGCRPVAIKIILPERTVNATPECKAKFQREVNLISKMQHENIVKFIGACVEPSMMIVTELLESGSLQKNLKSIYPWTLGLEQSLSFALDISQAMEYLHANGIIHRDLKPGNLLLTKDKMHVKLADFGLAREDICDEMTCEAGSYRYMAPELFNKDPLPKGTKKFYDRKADVYSFAMVLWSIIKNQTPFKERKDLMAAYAAVNNLRPSVDEFPTPVLPLLQSCWAEDPKLRPEFTEITETLAELLQNFWPPRTTLSSITEIEEIESSDDEEIPKAHESSLDSGEENNIPKHHDDDYGTRKPNGGTESESHSQSRRAQTPLPASTEGKPKKKSKFRFLLSCFRSCHAF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00071 420 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Sebi161g00071 420 SUPERFAMILY Protein kinase-like (PK-like) 50 332 IPR011009 -
Sebi161g00071 420 CDD STKc_MAP3K-like 62 314 - -
Sebi161g00071 420 MobiDBLite consensus disorder prediction 375 393 - -
Sebi161g00071 420 Pfam Protein tyrosine and serine/threonine kinase 58 314 IPR001245 GO:0004672|GO:0006468
Sebi161g00071 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Sebi161g00071 420 Gene3D Phosphorylase Kinase; domain 1 44 136 - -
Sebi161g00071 420 Gene3D Transferase(Phosphotransferase) domain 1 137 356 - -
Sebi161g00071 420 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 52 318 - -
Sebi161g00071 420 SMART serkin_6 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi161g00071 420 MobiDBLite consensus disorder prediction 342 374 - -
Sebi161g00071 420 ProSiteProfiles Protein kinase domain profile. 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi161g00071 420 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Sebi161g00071 420 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Sebi161g00071 420 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Sebi161g00071 420 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Sebi161g00071 420 MobiDBLite consensus disorder prediction 336 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00071 Sebi-Chr161 1072324 1076537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00071 38 321 MAP Kinase Kinase Kinase AT5G66710 56.140 6.22e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi161g00071 PK_Tyr_Ser-Thr 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00071 - K04427 gsj:114390113 421.779