Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00051 ATGGCCAAGTTCTTCCTTCCCTTTCTTGCACTCACTTTGTTTTTCACTACTATCATAGCTCAATCACAACAGAACAATGGAACAAACTTTTCATGCCCTGTGGATTCACCTCCTTCTTGTGAAACATATGTGGCATACATTGCTCAGTCTCCAAACTTTCTGAGCCTGACAAACATATCTGATATATTTGATACAAGCCCTTTATCCATTGCAAGGGCCAGTAACATAGAGGCTGAGAATGATAAGCTGATTCCAGGCCAACTCTTACTGGTACCTGTAACTTGTGGTTGCACTGGAAAGCGTTCTTTTGCTAACATCTCCTATGAAATGAAGCTAGGTGATAACTACTACTTTGTTGCAACCACTTCATACGAGAATCTCACCGATTTTCAGGCAGTGGAAGATTTAAACCCCGGTATAAATCCAAGAACGTTGCCACCAGGCATGAAAGTAGTATTCCCATTGTTCTGCAGATGCCCTTCAAAGAATCAGTTGAACAAAGGGATTAAGTATCTGATTACTTATGTGTGGCAGGCCAATGACAATGTTCCCCTTGTAAGTTCCAAGTTTGGTGCATCATCAGTGGACATATTGGCTGAAAACAACTATGGTCAAAACTTCACCACTGCAACCAACCTTCCAGTTTTGATCCCAGTGACAAGGTTGCCAGATCTTACTCAACCTATTTCAAATGGAGGAAAAAGCAGGATTCATCTTCCGGTTATAATTGGTATTAGCCTTGGATGCACACTTCTGATTGCAGTTTTAACTTTATCACTGGTATATGTATATTGTCTGAGAATGAAGGCTAGGAATATCAGTGTTTCCTCAGCTGAGAATGCAGATAAGCTACTTTCAGGAGTTTCAGGGTATGTAAGCAAGCCAACCGTGTATGAAATTGATGCAATCATGGAAGGTACCATGAACCTCAGTGACCAGTGCAAGATTGGGGAATCAGTATACAAGGCCAAGATAGATGGTCGGATTTTAGCAGTGAAAAAAGTCAAGGAAGCATCTGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTGGTGAAATTAATGGGTGTGTCTTCAGATAATGATGGAAACTGTTTCTTGGTTTATGAATATGCTGAAAATGGGTCTCTGGATGAGTGGCTATTCTCCAAGTCTTCAGGAACCTCAAACTCCATGGTCTCTCTTACATGGTCTCAGAGGATTAGCATAGCAATGGATGTTGCTGTGGGTCTACAATACATGCATGAACATACTTATCCAAGAATAGTTCACAGGGACATCACAACAAGTAATATCCTTCTTGACTCAAACTTTAAGGCCAAGATAGCAAATTTCTGTATGGCCAGAACTTCAACCAACCCTATGATGCCAAAAATTGATGTCTTTGCTTTTGGGGTGGTTCTGATAGAGTTGCTCAGTGGAAGGAAAGCCATAACAACAAAAGAAAATGGTGAGGTGGTTATGCTGTGGAAAGATGTTTGGAAGATCTTTGATACAGAAGAGAATAGAGAGGAGAGTCTCCGAAAATGGATGGATCCTAAGTTAGAGAGCTTTTATCCAATAGATAATGCTATCAGCTTGGCCTCTTTGGCAGTGAATTGCACTGCAGAGAAATCTTTATCCAGACCAAGCATGGCAGAAATTGTTCTTAGCCTCTCTTTTCTCACCACTCAACCATCTTACCCAACATTAGAGAGATCCTTGACTTCTGGGTTAGATGTAGAAGATACTCAAATTGTCACTTCCATAGCTGCACGTTGA 1767 0.4092 MAKFFLPFLALTLFFTTIIAQSQQNNGTNFSCPVDSPPSCETYVAYIAQSPNFLSLTNISDIFDTSPLSIARASNIEAENDKLIPGQLLLVPVTCGCTGKRSFANISYEMKLGDNYYFVATTSYENLTDFQAVEDLNPGINPRTLPPGMKVVFPLFCRCPSKNQLNKGIKYLITYVWQANDNVPLVSSKFGASSVDILAENNYGQNFTTATNLPVLIPVTRLPDLTQPISNGGKSRIHLPVIIGISLGCTLLIAVLTLSLVYVYCLRMKARNISVSSAENADKLLSGVSGYVSKPTVYEIDAIMEGTMNLSDQCKIGESVYKAKIDGRILAVKKVKEASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAENGSLDEWLFSKSSGTSNSMVSLTWSQRISIAMDVAVGLQYMHEHTYPRIVHRDITTSNILLDSNFKAKIANFCMARTSTNPMMPKIDVFAFGVVLIELLSGRKAITTKENGEVVMLWKDVWKIFDTEENREESLRKWMDPKLESFYPIDNAISLASLAVNCTAEKSLSRPSMAEIVLSLSFLTTQPSYPTLERSLTSGLDVEDTQIVTSIAAR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00051 588 Pfam LysM domain 55 92 IPR018392 -
Sebi161g00051 588 Pfam Protein tyrosine and serine/threonine kinase 334 453 IPR001245 GO:0004672|GO:0006468
Sebi161g00051 588 Gene3D Transferase(Phosphotransferase) domain 1 456 567 - -
Sebi161g00051 588 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
Sebi161g00051 588 ProSiteProfiles Protein kinase domain profile. 278 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi161g00051 588 SUPERFAMILY Protein kinase-like (PK-like) 314 557 IPR011009 -
Sebi161g00051 588 Gene3D Transferase(Phosphotransferase) domain 1 307 455 - -
Sebi161g00051 588 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00051 Sebi-Chr161 808993 810759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00051 39 555 Receptor kinase-like Gene Family AT2G23770 30.017 1.46e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi161g00051 PK_Tyr_Ser-Thr 3.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00051 - - gmx:100301877 912.524