Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00035 ATGCGCCGCTGTCCGTCCCCTGCTGGTCGACCTCCGCCGCCGCAAGTCCTTCTCCTGTTCTTCCATCACCGCCGTAGACGTCCCCTTCGAGCGCCGTCGCGGCCCTTGAAACCTGTTCGAAGGCCACCTTTGAAGGGGAGGACGCGTCACAGCGAGAACTCCGTCCCCGCCGTCGTCCCGTGTTCAAGCTCGAACACCCCCGTGCGTCCCCTGTCATTGGAGCTCCGCCGCCGCCGTCACCTTGAAGCCTGTTCGAGCTCCCCTATGGACAATAATGATGATGAATATGTTGTTCATTTGGACAATGATAACGATCCGAGTTTTCGTTGTAGTGTCAGCGCTGATGATAGTACGAGTGAAGAGGATTATGATTTGGGTGATAATAGTGAGCCGAATAATGTAGATGCAACGGAAGAAGAATATAAAAAGATAATAGACTTGACTGTTGAAGATATATCAAGTATGGAGTTTTGTAGTGAAACTGAAGTTTGTGAGTTTTATACTTTGTATGCAAAATTACATGGATTTGTGATGAGGAAAGATGATGTTGCTCGAGATTATCATGGAAATTTGATTATGCGTCAGTTGGTGTGCAATAGGGAGGGAAGGAGAGATAAAAAACACTTCATGAGGGTAGATAGAAAAAGGGCTCACAGACCAATCACACGAACTAAATGTGAAGCTAGGTTGCGGGTACACTTTGATTATAGATCCTCAAAATGGAAAGTGGTTGCATTTGAGGAGTCTCATAATCATGAGCTTACCCCTCCCAAATGCATACACTTAATTTCTGCATACCGTAAGTTGAGTGATGGGGATAAGGCTCAGGCTCAAAGTTTACACTCTTATGGTGTTAGAACCTGTCATATAATGGGATTCATGTTGGCTCAAAAGGGGGGGATGGTGAGGAGACATGGTCTTGAAGGTAATAGATGGGTTTGTAAAACTTATGAAAACAAGCAGATGTGGGCTACTGCTTACTTGCGCGATATATTTTTTGGTCGCATAAGAACTACTTCACAATGTGAAGGTATTAACTCTTTGTTAAAGTCATATGTCAAGAAGAAGAATACATTGGTTGATTTCTTGCACAATATGGAACAAGTTATGAGACAGTATAGAAACAATGAACTTGTTGCTGATTTTAAAGATATTTATACAGAACCTGTGATAACTACCTCTTTGTATGAGCTTGAGAGGCATGCTTCAAAGATTTTTACTCTAGAGATTTTCAGAGAAGTAAAGTCGGAGATTGAAGAAGCTGGTGCCTTAGTTGTTAATGAGCAATCACAAAATGGACAGCATTTGATGTTTCAGATGAGCAAATTTCGAGTCCCTGATTCTGAAATCGTGTTATATATGATAGAGTTGAGTTGA 1377 0.4263 MRRCPSPAGRPPPPQVLLLFFHHRRRRPLRAPSRPLKPVRRPPLKGRTRHSENSVPAVVPCSSSNTPVRPLSLELRRRRHLEACSSSPMDNNDDEYVVHLDNDNDPSFRCSVSADDSTSEEDYDLGDNSEPNNVDATEEEYKKIIDLTVEDISSMEFCSETEVCEFYTLYAKLHGFVMRKDDVARDYHGNLIMRQLVCNREGRRDKKHFMRVDRKRAHRPITRTKCEARLRVHFDYRSSKWKVVAFEESHNHELTPPKCIHLISAYRKLSDGDKAQAQSLHSYGVRTCHIMGFMLAQKGGMVRRHGLEGNRWVCKTYENKQMWATAYLRDIFFGRIRTTSQCEGINSLLKSYVKKKNTLVDFLHNMEQVMRQYRNNELVADFKDIYTEPVITTSLYELERHASKIFTLEIFREVKSEIEEAGALVVNEQSQNGQHLMFQMSKFRVPDSEIVLYMIELS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00035 458 Pfam FAR1 DNA-binding domain 165 255 IPR004330 -
Sebi161g00035 458 MobiDBLite consensus disorder prediction 28 68 - -
Sebi161g00035 458 MobiDBLite consensus disorder prediction 28 44 - -
Sebi161g00035 458 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 301 432 IPR031052 GO:0006355
Sebi161g00035 458 MobiDBLite consensus disorder prediction 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00035 Sebi-Chr161 553171 555985 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi161g00035 FAR1 1.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00035 - - aip:107640898 265.003