Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00028 ATGTTTCTCCATCAGCAGACAAATTTCGCAATTGTGATCACAATCTTAATCTTCTTAGTGAGCACAACAAGAACACAAAACCTCCCAAACTGTGAGAACCGTTGCGGAGAGGAGTCCGTGCAGTACCCTTTTAGCTTCTCTGAAGGTTGTGGAATCAAACTAAACTGTAACAACAGCCAAGTCCAAGTGGGTGATTTTCTGGTTCAGAACATAACCAGCAGCAGCATATTCATCGATGTCCCTGCAAAATGCAACCGTACCATGCAATCCATTCATCCACTTTTCAGTGACAACTTTGCTCCCACACGGAACAATAGTTTTCTAGTGCAAGATTGCAAAGCTCCTCTGGGTGGCTGCGTTATTCCCGCTTCAAGTTTTGTGGGGAATTGTGATAACAGAAGTGGTAATATCAGTTGTTTTACACAGCAGCAGCAACAGGATCAAGAAGTGGATGTTGTGTCATATGAGGAATTGAACCAAACTGGGTGCAATTACTTGTTCTCAGCAGTTGCTGCCATTGAGAATTCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCAAGGGTCGTGTCAATGCTCTCCCAACGCTACCTGCACAATGGTTCATCTCAAAGAAGGGAGCTTTGGATACCGGTGTCAATGTCCAAATGGTTTCCAAGGAGACGGCTTCGCCAACGGCACCGGTTGCCGGAGAGGTCCAAGCTGCAGTGCTTCAACACTGACGTCTGGGGGGTGTGGGAATGGAGCCAAAATTGGTGTTATCGTCGGAGTGATAGTAACTGGAGCTGTGGTCGTGGTTGCTCTCTTTGTCCTATGCTACTGTGCCAGGCGCCGTTCTACTTGGTTGAGAAAACATACCAGAGTAAAGCTCCTATTACGTGAAGCTGCAGGCAACTCTAGTGTACCTTTATACCCTTATAAAGAAATAGAGAAGGCAACAAATTCTTTCTCTGAGAAACAGAGGCTGGGAAATGGGGCTTTTGGTACCGTTTATGCTGGAAAACTTCATAATGATGAGTGGGTTGCTATAAAGAAGATAAGGTATAGAGATACTAATAGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAATTTAGTTCGCCTCCTAGGTTGCTGCATAGAGGAAGGAGAGCAGATACTTGTTTATGAATATATGCCCAATGGAACACTATCTGAGCATTTGCAAAGAGAAAGGGAGATAATAACTGCCATGAAAGTGGTTGATTTTGGTCGACCTCAGAGTGAGGTTAATTTAGCTGCACTTGCTGTTGATAGAATCAGAAGGGGTTCTGTAGATGAGATCATAGATCCCTTCCTTGAACCACATAGAGATGCTTGGACACTATATTCCATTCATAAGGTGGCTGAGCTGGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGACAGAAGTAGCTGAGGAGCTAGAACATATCAGACGCAGTGGATGGGCAACTATGGAGGAAACTATATGCTTGGCTTCATCAATTGGGTCCACCAGTTCATCACCTCGCAATGGAAGTGAGAAGTCACTGGGTGGTGGTATTAAGTTCAAGAAACCAGGGCAAGGGAGTGAGGGATTGATTGTTCCACAGAAGACCGAGAGTTTCTTGCATTCTATGGAGATGGAGGTGAAGGACAGCTCCCCTGTATCGGTGCATGATCCTTGGTCAAGTGGACACAGCTCACCTTCAACAAACAGCTTGTTGGGGAATGTCGTTCGGTGA 1764 0.4541 MFLHQQTNFAIVITILIFLVSTTRTQNLPNCENRCGEESVQYPFSFSEGCGIKLNCNNSQVQVGDFLVQNITSSSIFIDVPAKCNRTMQSIHPLFSDNFAPTRNNSFLVQDCKAPLGGCVIPASSFVGNCDNRSGNISCFTQQQQQDQEVDVVSYEELNQTGCNYLFSAVAAIENSLQFQVVELGWWLQGSCQCSPNATCTMVHLKEGSFGYRCQCPNGFQGDGFANGTGCRRGPSCSASTLTSGGCGNGAKIGVIVGVIVTGAVVVVALFVLCYCARRRSTWLRKHTRVKLLLREAAGNSSVPLYPYKEIEKATNSFSEKQRLGNGAFGTVYAGKLHNDEWVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPNGTLSEHLQREREIITAMKVVDFGRPQSEVNLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMTEVAEELEHIRRSGWATMEETICLASSIGSTSSSPRNGSEKSLGGGIKFKKPGQGSEGLIVPQKTESFLHSMEMEVKDSSPVSVHDPWSSGHSSPSTNSLLGNVVR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00028 587 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 408 574 IPR044652 GO:0004672
Sebi161g00028 587 ProSitePatterns Protein kinases ATP-binding region signature. 324 347 IPR017441 GO:0005524
Sebi161g00028 587 MobiDBLite consensus disorder prediction 507 521 - -
Sebi161g00028 587 ProSiteProfiles Protein kinase domain profile. 318 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi161g00028 587 SUPERFAMILY Protein kinase-like (PK-like) 308 494 IPR011009 -
Sebi161g00028 587 MobiDBLite consensus disorder prediction 507 537 - -
Sebi161g00028 587 Pfam Protein tyrosine and serine/threonine kinase 321 418 IPR001245 GO:0004672|GO:0006468
Sebi161g00028 587 MobiDBLite consensus disorder prediction 564 587 - -
Sebi161g00028 587 FunFam Wall-associated receptor kinase-like 14 285 393 - -
Sebi161g00028 587 Gene3D Phosphorylase Kinase; domain 1 279 393 - -
Sebi161g00028 587 Gene3D Laminin 192 227 - -
Sebi161g00028 587 Gene3D Transferase(Phosphotransferase) domain 1 408 503 - -
Sebi161g00028 587 MobiDBLite consensus disorder prediction 555 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00028 Sebi-Chr161 504300 508064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00028 408 587 Receptor kinase-like Gene Family AT2G23450 61.111 1.54e-57 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi161g00028 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00028 - - gmx:100779130 538.88