Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi161g00021 ATGTCATTTTCGTTAACTCCCGCCAGTTACAGTACCAATTGGGCGGATCTTCATCCTGATTCCCAGAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGGTTAGATCAGTGTAGTCGTCTTTATGATTCTTCAATTTCAAACGATGGATTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAAAGACAGAAAACTTTGCTGCAGGAACTGATGTCCGTTGTTAAGGATATGTTACACAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCACGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACAGCCCCGTCACAGACTCCTGGAGCGACTACAAGTACCCAACCAACAAGTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCCGCCTTTATACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGCGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTTCTTTTCTTAGATTCAGAGAGAAACGCTTCTAGTACTGGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAGCATTCACCAGTATATTGAATCCATGAAATCAGCATACCTAGCTAATCAGCGCCGCCGGGGGGAGGTGAATGATCCATTTTTAGAGGCCGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGGGCATTAACTGCCCCACAGACATCTGCGGCAACTTCATCTTCATCATCAGGAAGTGGTTTCTCTCTTTTTAGCACACCGTCTTCTGCTCCATCATCTTCTTTGTTTACAACACCAGCGACTCCTGCTCCAGGATCCTCTTGGTTTGCATCATCTAGTGCTACACCTCAAACCTCAGTTTTTGGTTCTACATCATCATCCTTGCCTGGCGTTGCATCAACTCCCTCCCTGTTCAGTAATACTGCTCCATTGTTCAGTTCAACTCCAGCTGCAGGTTCACTCTTTTCAACTCCATTTGCTTCAGGTGCTGCAACAGGATCAGGGGCAAGCTTTGGGCCTGGATCGGTGTGTAAACTTTAA 1239 0.4528 MSFSLTPASYSTNWADLHPDSQKFLLQIEERILEYRDESQRLDQCSRLYDSSISNDGFELDASHIVQELGGISTAMERQKTLLQELMSVVKDMLHNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGATTSTQPTSTSIVPVFDFYSGLPKKPSAFIQQTVLRFEKYLGECHQWIEELEQLLFLDSERNASSTGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLANQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAPQTSAATSSSSSGSGFSLFSTPSSAPSSSLFTTPATPAPGSSWFASSSATPQTSVFGSTSSSLPGVASTPSLFSNTAPLFSSTPAAGSLFSTPFASGAATGSGASFGPGSVCKL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi161g00021 412 MobiDBLite consensus disorder prediction 118 137 - -
Sebi161g00021 412 MobiDBLite consensus disorder prediction 115 137 - -
Sebi161g00021 412 Gene3D - 154 244 - -
Sebi161g00021 412 MobiDBLite consensus disorder prediction 271 309 - -
Sebi161g00021 412 MobiDBLite consensus disorder prediction 247 309 - -
Sebi161g00021 412 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 392 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Sebi161g00021 412 MobiDBLite consensus disorder prediction 247 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi161g00021 Sebi-Chr161 422740 426036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi161g00021 7 405 NAC Transcription Factor Family AT4G37130 64.146 3.32e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi161g00021 K14307 - gmx:100776992 595.119