Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00077 ATGGATAAGGCTTCTATCATAAAAAACACTATCGAATATGTGAAATGCCTTCAGAAGAGTGTAAAAGATTTAGAGGAGCAGACCAAGAAAAGAAAAACAGAATCTGTGGCATGCTTCAAAAATGACAAAGCCGTTGCTGATGACTCTGAACCTACAAAGAGATTCCCCATTGTTGAAGCAAGAGTCTCAGCAAAAGATCTACTCATCAGAGTTATGTGTGAGAATCGAAAGGGCATTGTAATTAAACTATTGACCAAGCTTGAAGCTCATAATCTCTCTGTACTTTGTAGCAATGTTTTGCCATTTGGGAATTCTACTCTGAACATTGACATCATTGCTCAGGTGGACCACGAAGGATTCAACATGAAAATGGACGAACTAGTGGAAAATGTGATCAAGGATTTGTTGGGGTGTTGTAATGACTTGCAACAATAA 435 0.3816 MDKASIIKNTIEYVKCLQKSVKDLEEQTKKRKTESVACFKNDKAVADDSEPTKRFPIVEARVSAKDLLIRVMCENRKGIVIKLLTKLEAHNLSVLCSNVLPFGNSTLNIDIIAQVDHEGFNMKMDELVENVIKDLLGCCNDLQQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00077 144 Coils Coil 7 34 - -
Sebi160g00077 144 PANTHER BHLH TRANSCRIPTION FACTOR 1 133 - -
Sebi160g00077 144 Gene3D - 1 39 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00077 Sebi-Chr160 1593436 1594041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00077 1 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 41.379 1.46e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00077 - - gmx:100815351 164.466