Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00075 ATGGCATCAATGGATGAGTCATGGGAAAATTTGCTTTCTGATCTGGAAATGGATGATTGTCATTTATTCAATGAATACATGAACTCTTTTGAGGAAGAGTTAAGCAACAATGGAGAGATTTCATTACAATCAGAACTATCTTTGGAAGGCCAATCTTCCAGTTCAAATTTCACTACTGAAAACATCCATGTTGCTGCCGCAGACAATAACAACACTATGAACAATTCACTTTCGGAAGAGAACACTGATTTTAGTCTCAAACAACATGAGTCTTTAGAGGAATGCACCGTTGTAGTGCCAAATAATATTCCCAAGGAAACACACGATAAACATTATGATGATGAACAATCAAAGGAGAACCAAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAGCTCTTCTCAAATACAGGATCACATTATCGCTGAGAGAAAGAGAAGAGAGAATCTCACCAAATTGTTCATAGCACTTTCTGCGGTTATTCCTGGCTTGAAAAGGATGGACAAGGCTTCTATAATCAAGAAGGCTATCGATTATGTGAAATGTCTTCAGAATCGAGTAAAAGATTTAGAAGAGCAAAGCAAGAAAAGAAAGACAGAATCTATGGTATGTTTCAAGGACGACAAATCTAATAGGGTTGTTGCTGTTGCTAACGACCCTGAAGCTATGAAGAGATTCCCCAATATTGAAGCAAGGGTCTCAGCAAAAGATGTACTCATCGTAGTAATGTGTGAGAAACAAAAGGACATTGCACTCAAACTACTGGCCAAGCTTCAAGCTCATAATCTCTCTGTCGTTTGTAGCAATGTTTTGCCATTTGGGAATTCTACTCTAAACATTATTACCATCGTTGCTCAGGTGGACCACGAAGATTTCAGCATGACAATGGACGCCCTAGTGAAAAATGTGATCGAGGATTTGTTGGGGGTGTTGTAA 942 0.3854 MASMDESWENLLSDLEMDDCHLFNEYMNSFEEELSNNGEISLQSELSLEGQSSSSNFTTENIHVAAADNNNTMNNSLSEENTDFSLKQHESLEECTVVVPNNIPKETHDKHYDDEQSKENQEELQNRKSKRCRSSSQIQDHIIAERKRRENLTKLFIALSAVIPGLKRMDKASIIKKAIDYVKCLQNRVKDLEEQSKKRKTESMVCFKDDKSNRVVAVANDPEAMKRFPNIEARVSAKDVLIVVMCEKQKDIALKLLAKLQAHNLSVVCSNVLPFGNSTLNIITIVAQVDHEDFSMTMDALVKNVIEDLLGVL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00075 313 SMART finulus 142 191 IPR011598 GO:0046983
Sebi160g00075 313 Coils Coil 175 202 - -
Sebi160g00075 313 MobiDBLite consensus disorder prediction 104 138 - -
Sebi160g00075 313 Pfam Helix-loop-helix DNA-binding domain 140 186 IPR011598 GO:0046983
Sebi160g00075 313 PANTHER BHLH TRANSCRIPTION FACTOR 19 305 - -
Sebi160g00075 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 201 IPR036638 GO:0046983
Sebi160g00075 313 MobiDBLite consensus disorder prediction 99 138 - -
Sebi160g00075 313 Coils Coil 312 313 - -
Sebi160g00075 313 Gene3D - 132 206 IPR036638 GO:0046983
Sebi160g00075 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00075 Sebi-Chr160 1537926 1541593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00075 116 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.500 7.36e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi160g00075 HLH 9.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00075 - - gmx:100815351 256.529