Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00074 ATGTCCCACATTCTGTCTTTAGAGGAATCCACTGTTAATGATGTAATTCCCAAGGAAACACACAAAAAACATTATGATGATGAACAATCAAAGGAGAAACGAGAGGAACTACAAAATAGAAAATCCAAGAGGTGTAGAAGCTCTTCTCAGATACAAGATCACATTATTGCTGAGAGAAAGAGAAGAGAGAATCTCACCAAAATGTTCATAGCACTTTCAGCGGTTATTCCTGGCTTGAAAAAGATGGACAAGGCTTCTATCATGAAGAACGCCATCAATTATGTGAAATATCTTCAGAAGAGTGTAAAAGATTTACAGGAGCAGAACATGAAAAGAAAGAATATGGAATCCGTGGTATGCTTAAGAAACGAAAAATCCAATATTGTAACTGTTGCTGACAACTATAAACCACTGAATAGATCCCCCATTATTGAAGTAAGGGTCCTAGCAAAAGACGTATTCATCAGAGTTGTGTGTGAGAATCGAAAGAACGTTCTAGTCAAGCTACTGGCCAAGCTTGAAGCTCATAATCTCTCTGTAGTTGGTAGCAATACTATACCATTTGGGAATTCTACTCTAAACATTACCATCACTGCTCGGGTGGACAATGATTTCAGCATGACAAAGGACGAACTAGTGAAAAAATTGATGGAGGATTTGTTGGAGACTTATGATTAA 678 0.3746 MSHILSLEESTVNDVIPKETHKKHYDDEQSKEKREELQNRKSKRCRSSSQIQDHIIAERKRRENLTKMFIALSAVIPGLKKMDKASIMKNAINYVKYLQKSVKDLQEQNMKRKNMESVVCLRNEKSNIVTVADNYKPLNRSPIIEVRVLAKDVFIRVVCENRKNVLVKLLAKLEAHNLSVVGSNTIPFGNSTLNITITARVDNDFSMTKDELVKKLMEDLLETYD 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00074 225 MobiDBLite consensus disorder prediction 1 53 - -
Sebi160g00074 225 Gene3D - 48 120 IPR036638 GO:0046983
Sebi160g00074 225 PANTHER BHLH TRANSCRIPTION FACTOR 21 221 - -
Sebi160g00074 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 112 IPR036638 GO:0046983
Sebi160g00074 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 98 IPR011598 GO:0046983
Sebi160g00074 225 ProSiteProfiles ACT domain profile. 154 225 IPR002912 -
Sebi160g00074 225 MobiDBLite consensus disorder prediction 14 53 - -
Sebi160g00074 225 Pfam Helix-loop-helix DNA-binding domain 53 99 IPR011598 GO:0046983
Sebi160g00074 225 SMART finulus 55 104 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00074 Sebi-Chr160 1302021 1448400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00074 33 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 46.269 4.80e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi160g00074 HLH 3.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00074 - - aprc:113850789 229.18