Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00071 ATGCAGCTCACTCACCTCTGCATCATTCTCCCCTCAGATTTTGATGAAAAAGAGAAACTTGATCATCAAACTCCACAAGCCATACAAAAAGTTAAGGCTAAAAAACATCCTCAAGGGGCATGTGGAGGACAAGTTATTGCCTTTTTACATGAGTCTTTGAGTAGGTTGCATGATTCAAAGTGGTGGAGCCTATGCCAAAATGGAGAAAGAAGAAAAAAGAAGAAGAATTATGATGGTGGTGTGTTTCATGACATGGATGGTGTTCAACTCACTGCCAAGATTGGCAGGGACAATCCAAGGATTTTCAGCTATGCTGAGCTTTATATAGGTTCAAGGGGTTTCTCTGAAGATGAAGTTCTTGGCAGTGGAGGTTTTGGTAAAGTGTATAAAGCTGTTTTGCCTAGTGATGGAACAGTGGTTGCTGTGAAATGCTGCTTAGCAGGGAAAGGCCAACAATTTGAGAAGACTTTTGCTGCAGAGTTAGCAGCAGTTGCTCATCTTCGCCACAAGAATCTTGTTCCATTGAGGGGTTGGTGTGTTTTTGAGGATCAACTTTATCTTGTTTATGATTACATGCCTAACCACAGCCTTGATAGAGTCCTATTTCGTAGGCCTGAGAATTTGAAACAAGAGCCTCTTGGTTGGGTAAGGCGTGGGAAAATTGTGAAAGGTTTGGCAAATGCATTGTATTATCTGCATGAACAATTGGAGACTCAAATAATTCATAGAGATGTTAAGACCAGCAATGTAATGCTTGATTCCTATTATAATGCTCGTTTGGGTGATTTTGGTTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATGATGAACCAAGAAAGGCTTCAACTTCAACCAAATTTGACCATTTCAGGTTGGCTGAGACAACAAGGATTGGTGGCACAATTGGGTACTTACCCCCTGAGAGCTTCCAGAAAAGAAGCATTGCTACTTCCAAATCTGATGTCTTCAGCTTTGGGGTAGTTGTGTTCGAATTGGTGTCTGGAAGGAGAGCTATAGATCTTACATACCCTGATGACCAAATCATTTTGCTTGATTGGATTAGAAGGCTATCTGATGAAGGGAAGCTTGTTGATGCAGGGGACACAAGGCTACTAGATGGTTCCTACAAGCTTTTTGAGATGGAGCATTTGATTCACATAGGTCTTTTATGTACACTCCATGATCCACAATTGAGACCAAGCATGAAATGGATTGTGGAAGCACTTTCTGATATTTCAAGCAAATTGCCAGCACTCCCTTCATTTCACTCCCATCCTATGTACATCTCTTTGTCTTCCTCATCTGAGACTAGTCCAATCAGCACAAGAGGCACTGATTCAGGCTCCAACACACACAGTGCTAGTGCTAGCAATCATGTTGCTTCCAATATGTCACAGCCAAAGGAGAGACCTTATATGGAGATACCATACAAGGAGATTGTTTCAGCCACAGATAATTTCTCAGAGGGAAGAAGGGTGGCAGAGCTTGACTTTGGAACTGCTTACTATGGCATCCTTGATGATCACTACCATGTCATGGTAAAACGCCTTGGCATGAAGACATGTCCTGCATTACGCCATAGATTCTGCAATGAACTAAGGAATTTGGCAAGACTTCACCACAGGAATTTGGTGCAACTTAGAGGATGGTGCACTGAACAAGGAGAGATGCTTGTGGTTTATGATTACTCTGCAAGACTAATTCTGAGTCACCAAATTCACCACCATAACCATGGTAGAAATGGGAATTCTGTCCTCAAATGGCATCATAGATACAACATAGTGAAATCACTTGCTTCAGCACTTCTCTATCTGCATGAGGAATGGGATGAACAAGTCATTCATAGGAACATCACCTCTTCAGCAGTCATTCTTGAACCTGATATGAACCCAAGACTAGGTAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAGCATGGTCATCATGTCATCACTGATAGAAGCAAATCAGTTTGTGGGATTTTCGGCTACATGTCGCCGGAATATGTGGATTCTGGTGAGGCAACTGCTGCTGCTGATGTTTATAGTTTTGGTGTGGTGGTGCTTGAAGTTATCAGTGGACATATGGCTGTGGATTTAGGCAACCAGAGGTTCTATTGGTAA 2127 0.4208 MQLTHLCIILPSDFDEKEKLDHQTPQAIQKVKAKKHPQGACGGQVIAFLHESLSRLHDSKWWSLCQNGERRKKKKNYDGGVFHDMDGVQLTAKIGRDNPRIFSYAELYIGSRGFSEDEVLGSGGFGKVYKAVLPSDGTVVAVKCCLAGKGQQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNHSLDRVLFRRPENLKQEPLGWVRRGKIVKGLANALYYLHEQLETQIIHRDVKTSNVMLDSYYNARLGDFGLARWLEHELEYDEPRKASTSTKFDHFRLAETTRIGGTIGYLPPESFQKRSIATSKSDVFSFGVVVFELVSGRRAIDLTYPDDQIILLDWIRRLSDEGKLVDAGDTRLLDGSYKLFEMEHLIHIGLLCTLHDPQLRPSMKWIVEALSDISSKLPALPSFHSHPMYISLSSSSETSPISTRGTDSGSNTHSASASNHVASNMSQPKERPYMEIPYKEIVSATDNFSEGRRVAELDFGTAYYGILDDHYHVMVKRLGMKTCPALRHRFCNELRNLARLHHRNLVQLRGWCTEQGEMLVVYDYSARLILSHQIHHHNHGRNGNSVLKWHHRYNIVKSLASALLYLHEEWDEQVIHRNITSSAVILEPDMNPRLGSFALAEFLSRNEHGHHVITDRSKSVCGIFGYMSPEYVDSGEATAAADVYSFGVVVLEVISGHMAVDLGNQRFYW 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00071 708 SUPERFAMILY Protein kinase-like (PK-like) 464 700 IPR011009 -
Sebi160g00071 708 Gene3D Phosphorylase Kinase; domain 1 87 191 - -
Sebi160g00071 708 ProSiteProfiles Protein kinase domain profile. 114 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00071 708 Gene3D Transferase(Phosphotransferase) domain 1 569 706 - -
Sebi160g00071 708 ProSiteProfiles Protein kinase domain profile. 487 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00071 708 PANTHER - 75 411 - -
Sebi160g00071 708 SUPERFAMILY Protein kinase-like (PK-like) 98 440 IPR011009 -
Sebi160g00071 708 Pfam Protein tyrosine and serine/threonine kinase 491 696 IPR001245 GO:0004672|GO:0006468
Sebi160g00071 708 ProSitePatterns Protein kinases ATP-binding region signature. 120 149 IPR017441 GO:0005524
Sebi160g00071 708 SMART serkin_6 114 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00071 708 Pfam Protein kinase domain 115 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00071 708 Gene3D Phosphorylase Kinase; domain 1 446 563 - -
Sebi160g00071 708 MobiDBLite consensus disorder prediction 438 468 - -
Sebi160g00071 708 Gene3D Transferase(Phosphotransferase) domain 1 192 416 - -
Sebi160g00071 708 MobiDBLite consensus disorder prediction 438 465 - -
Sebi160g00071 708 FunFam Receptor like protein kinase S.2 88 191 - -
Sebi160g00071 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Sebi160g00071 708 FunFam Receptor like protein kinase S.2 192 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00071 Sebi-Chr160 1259616 1261843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00071 477 701 Receptor kinase-like Gene Family AT3G53810 38.053 1.08e-40 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi160g00071 Pkinase 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00071 - - gmx:100781955 1120.92