Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00070 ATGTGTTCTGAGGAATCAAAGGACTTTGGATATATGTCCTTCAATCAATCAAAGTCCGACAAGAACGACGCCGTTTTACCGAAAATCCGGGCGATCCGCGAGCTTCAATCAGCAGAGAGGATCCTCAGGCGCCTACGGCAAGGGTGGGTGGCGGTGGCGGCGGTGGAGGACCCGCGCCGTCGAGCACCTCGGCTTCATCACTCTCCTCTAGCCGGAGGAGATGCATCAAAGGCATTCCCTTTTCAATTTGGATCAATTATTCCTAGCTATATGAATGGAATGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGTTCGTCACGACTCGTATAAATCTGCTGCATCTTCAGTGCCAATACCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAGATGCAGGTGTCATTGAGCAATCTAATGCTGGGAGACTATACAGGGACTAAGGCTAAAAAGGATCCTCAGGTGACAGCTTTGACCCCAGCAAACCAGATGCAGAAGCCTTCTGTTCTTCCTGTAACTGGGATTTCAATGGCAACACCGTATCACCAGTCACATGCATCTTTACAGTTTGGTGGTCCTAATCCACAGATGCAATCTCAGGGCCTTCAGCCTCATCCGATGCACCCTCAGGGGATCATACATCAAGGCCAAAATGTGGGTTTCACTCCTCAAATGGGTCATCAATTGTCCCATCAATTAGGCAACATGGGTATTGGCATCAGCCCCCAATATCCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGAAAAACTACTCCTGTGAAGATAACTCATCCTGACACACATGAAGAGCTGAGGCTTGATAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCCGTTAAATCTTTTGGGGCTTCACATCCTATGAGCTATTATCCATCCAGCTCATACAACACCACTTCTCTCTATTATCCACCTTCTAGCTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAATTCTCAGCCACCATTATTCAATTATCCTGTGAACCGTGGTCCGCAAAATCATCTTGTGACACTAGCTCCTCTGTGCCACAAAAAGGGTCTGAAACTTCTTTGGTTGAAACAATCTGCTGCACCTGTTGTTGTAACTGCTGAGAAGCTTGCTGACACTTCCTTGGTGCTGCCTTCAGCAGCTGTGAGTGAGGATTCTGCCTCAGTTGTGGCTAATAATGAAGACAGAAGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAACCAGAAGAAGAAACTAGGGAAGAAAGGATATGGTGCTCAAGCTGCTGATAGTTTGAACCATCATAAGCATGATAAGATAGATGAATCATCTGAAGATCTGCACTCTACTGATCTTCCAGAAACAACTTCAAAGGATATCAATGATAGTTCAGAGAATGCTGGCAGTGACTCAATGTCTCTTTCAGTATCAAATACCAAGGATAGACCAATATTAGAACCAAATAAGGGTCCTGAAGAAAAGAAAGAAGCTGTCTTGATTTCAGAGAGCACAGAAAGTGCTTCTACTTCAGGAAGTTCAATGCAGTTGCCTGCAGATGCTTCTCAGTCAGATGCTATAGCAGGTGAGAAATGTGGACACAGTAAAGCTGAACCTGATGACTGGGAGGAGGATGCTGACATGTCTACTCCAAAACTGGAAGTTGATGATAAATCTCAACAGGTTAATGATGGAAGTGGAGGCCAGGTGGGATGTCTCGAATGGAACGTCGTGGCAGTATTGTGGCTGATGAAGACAGATGGAATAAAGTTTCTAGTGCTTTTCATTCTGGACGAGGTTTGGATGGTATTGGGGGTAATGTGGGATTTCGAACTGGCCAAGGAGGCAATTTTGGTGTTTAAGGAATCCTCGTGCACAGACACCTGTGCAATATGCTGGGGGATCCTTTCTGGGCCAATGCAATCTGTGGGAAATCAAGGTGGGATGCAACGAAACAGCCCTGATGGGGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAGACTCCCATGCAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGTGACAGATGTGGAAGAGGCAAAGCAGCGGCAGTTGAAAGGTATCTTGAACAAGTTAACTCCTCAGAATTTTGATAGACTCTTTGAACAGGTAAAAGCAGTTAATATTGACAGTGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTCACATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAGAAGATAACCTTTAAAAGAGAACAAGAAGAAGCAAATAAGGTTGATGAGGGTGAGGTCAGGCAGTCTAAAGAAGAAAGGGAGGAGAGAAGAGTCAAGGCGAGAAGGCGCATGTTGGGAAACATCCGATTGATCGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTTGGTCAATATGAGGATCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATCGGGGACATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCTTATTTTGAAAGAATGAAATTATTATCAAACAACATGAATTTATCTTCTCGGGTGAGGTTTATGTTGAAGGATGTCATTGACTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGCACAAGAGAGGCAGGCTCAAGCTGGTAGGATGGGTCGTGGTCTAGGCAACAATCAGTCAACCAGAAGGAACCCTGTGGATTTTGGTCCAAGGGGATCATCTATGTTGTCTTCTCCTAATTCTCAGATGGGTGGACTGCGTGGGCTGTCTACTCATGTTCGTGGATATGGTTCTCAGGATGCTCGTTTTGAGGAAAGACAATCTTATGAGGCTAGGACCTTGTCAGTTACCTTGCCTCAAAGACCCTTAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATTTCTAATTTGCCAGTATCTGATGTGCATCCTGGCCCTGGAGACTCTCATAGAATGACAACTGGTCTTAATGGTTATAACAATTTATCAGAGCGTACACCATATAATTCAAGGGAGGATCTTGCATCAAGGTATATTACAGATAGGTTTTCAGGTCCAGCTGCTTATGATCAATCTAGTGCTCCTGATCGTAATATAAACTATGGTAACAGAGACTTGAGGAATGCTCCAGGTCTTGACAGACCTGTTGCAACTTCACCTCCTGCACAATTGCAAGGGTCAACAGTCTCCCAGAATGCTTCATCAGAGAAGGTTTGGACAGAAGAACGACTGCGGGACATGTCCATGTCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTCTATGCATCAAAGATTTGAACTATCCAAGTTTTCATCCTTCCATGGTTTCTCTCTGGGTCACGGACTCATTTGAGAGAAAGGACATAGAAAGAGATCTTTTGGCCAAACTGCTTGTCAAGCTTGTGAAATCTCAGGATGGCACCTTGAGTCAAGCTCAACTCATCAAAGGGTTTGAAGCGGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCGTATTTTTGCAAAAGCTATAACAGAGAATGTAGTCACTCTGAATGAGATTGGGCAGTTAATACATGATGGTGGGGAGGAGCCAGGCAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTAGAGGTAATAAAAACTGAGAATGGGGACGTAGTTCTCAGTGAGATCCGTACAAGCTCTAACTTGCGGTTGGAGACTTTTCGGCCACCTAATCCTCTTACATCCAACAACCACACTGCAAGGGGAGGAGCAAATGGCAGCCATGGTGCATGGTGCTGGTATAAGGTGGCAACTCAGTTGAAATCAGAAGGCCACAATGTTACAACTATTGAATTGGGTGGTTCTGGTATCAACCCAAAGCAGGTGCAAGAGATTCGTTCAATTTCAAAATACTATGAACCATTGATGACATTTATGGACTCTGTTCCTCCAGAGGAGAAGGTGATTCTTGTGGGTCACAGTCTTGGTGGGGTATCAACTTCTGTTGCTATGGAAAAATTCCCAGAGAAAATCTCAGTTGCAGTTTTTGTTACTGCATATGTGCTTAGTGAAAACCTCACATACCCTGTTCTTCTTCAAGAGTTAGCTAGAAGGACAACTTCAGTAATGGACACTCAGTTTTTCTTCTCTGATGGGCCCAAAAAACCAGCAACAGCTAGATTGATTGGACCCAAATTCATGGTATCCAAGATGTATCAATTATCACCACCTGAGGATTTGACTCTTGCTTTGTCCCTGGTGAGGCCTGTACCTATTTATAGTGATGTTGAACTATTGTTGAAGGAAACAACAGTTACTAATGAAAGAAATGGAAGGGTACCTAAAATTTTTATCATTAGCAAAAGAGACAATTTGGTGACAGAGGATACACAGAGGTGGATGATTAACAGAACTGGTCCATTTGCTGAGCTGAAAGTGATAAAGGATTCTGATCACATGGTGATGTTCTCCAAACCAATGAAGCTTAGTTCTCACCTTCTAAAGATTGCACAAAAATATTAA 4836 0.4431 MCSEESKDFGYMSFNQSKSDKNDAVLPKIRAIRELQSAERILRRLRQGWVAVAAVEDPRRRAPRLHHSPLAGGDASKAFPFQFGSIIPSYMNGMAIPARTSSAPPNLDEQKRDQVRHDSYKSAASSVPIPPVPKQQQPPRKMQVSLSNLMLGDYTGTKAKKDPQVTALTPANQMQKPSVLPVTGISMATPYHQSHASLQFGGPNPQMQSQGLQPHPMHPQGIIHQGQNVGFTPQMGHQLSHQLGNMGIGISPQYPQQQGGKFAGPRKTTPVKITHPDTHEELRLDRADAYSDGGSSGARSHPNIPSQSQPVKSFGASHPMSYYPSSSYNTTSLYYPPSSSLPLTSSQITPNSQPPLFNYPVNRGPQNHLVTLAPLCHKKGLKLLWLKQSAAPVVVTAEKLADTSLVLPSAAVSEDSASVVANNEDRRRESLSRSNSLKDNQKKKLGKKGYGAQAADSLNHHKHDKIDESSEDLHSTDLPETTSKDINDSSENAGSDSMSLSVSNTKDRPILEPNKGPEEKKEAVLISESTESASTSGSSMQLPADASQSDAIAGEKCGHSKAEPDDWEEDADMSTPKLEVDDKSQQVNDGSGGQVGCLEWNVVAVLWLMKTDGIKFLVLFILDEVWMVLGVMWDFELAKEAILVFKESSCTDTCAICWGILSGPMQSVGNQGGMQRNSPDGERWQRAASFQQRGLIPSPTPQTPMQMMHKAEKKYEVGKVTDVEEAKQRQLKGILNKLTPQNFDRLFEQVKAVNIDSAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDFSEDNEKITFKREQEEANKVDEGEVRQSKEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEDPDEEDIEALCKLMSTIGDMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRMGRGLGNNQSTRRNPVDFGPRGSSMLSSPNSQMGGLRGLSTHVRGYGSQDARFEERQSYEARTLSVTLPQRPLGDDSITLGPQGGLARGMSIRGSTAISNLPVSDVHPGPGDSHRMTTGLNGYNNLSERTPYNSREDLASRYITDRFSGPAAYDQSSAPDRNINYGNRDLRNAPGLDRPVATSPPAQLQGSTVSQNASSEKVWTEERLRDMSMSAIKEYYSARDENEIALCIKDLNYPSFHPSMVSLWVTDSFERKDIERDLLAKLLVKLVKSQDGTLSQAQLIKGFEAVLSTLEDAVNDAPRAPEFLGRIFAKAITENVVTLNEIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIKTENGDVVLSEIRTSSNLRLETFRPPNPLTSNNHTARGGANGSHGAWCWYKVATQLKSEGHNVTTIELGGSGINPKQVQEIRSISKYYEPLMTFMDSVPPEEKVILVGHSLGGVSTSVAMEKFPEKISVAVFVTAYVLSENLTYPVLLQELARRTTSVMDTQFFFSDGPKKPATARLIGPKFMVSKMYQLSPPEDLTLALSLVRPVPIYSDVELLLKETTVTNERNGRVPKIFIISKRDNLVTEDTQRWMINRTGPFAELKVIKDSDHMVMFSKPMKLSSHLLKIAQKY 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00070 1611 SMART if4_15 728 935 IPR003890 GO:0003723|GO:0005515
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 420 446 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 1114 1166 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 940 1000 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 1149 1166 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 1064 1097 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 940 959 - -
Sebi160g00070 1611 SUPERFAMILY alpha/beta-Hydrolases 1366 1609 IPR029058 -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 482 508 - -
Sebi160g00070 1611 FunFam Eukaryotic translation initiation factor 4G 728 948 - -
Sebi160g00070 1611 Pfam Serine aminopeptidase, S33 1372 1594 IPR022742 -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 967 1000 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 296 315 - -
Sebi160g00070 1611 Coils Coil 806 826 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 195 214 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 556 574 - -
Sebi160g00070 1611 Pfam MA3 domain 1175 1285 IPR003891 -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 412 574 - -
Sebi160g00070 1611 Pfam MIF4G domain 728 935 IPR003890 GO:0003723|GO:0005515
Sebi160g00070 1611 SUPERFAMILY ARM repeat 1168 1349 IPR016024 -
Sebi160g00070 1611 Gene3D alpha/beta hydrolase 1363 1611 IPR029058 -
Sebi160g00070 1611 ProSiteProfiles MI domain profile. 1172 1296 IPR003891 -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 457 481 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 254 315 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 527 546 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 1082 1097 - -
Sebi160g00070 1611 FunFam Eukaryotic translation initiation factor 4G 1166 1358 - -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 272 288 - -
Sebi160g00070 1611 Gene3D - 728 948 - -
Sebi160g00070 1611 Gene3D - 1164 1357 - -
Sebi160g00070 1611 SMART ma3_7 1173 1287 IPR003891 -
Sebi160g00070 1611 SUPERFAMILY ARM repeat 724 937 IPR016024 -
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 97 141 - -
Sebi160g00070 1611 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 246 1351 IPR045208 GO:0003743
Sebi160g00070 1611 MobiDBLite consensus disorder prediction 511 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00070 Sebi-Chr160 1226686 1239568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00070 71 366 Eukaryotic Initiation Factors Gene Family AT3G60240 43.598 4.48e-62 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00070 K03260 - gmx:100798562 1124.77