Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00060 ATGGGTTCACTTCCCAAGGGAACATATTCCCCAACCTCTCACCATCTCAGTTTGCTGCAACAAGTTATGAATAAAAGTGATGTAGCAAGCCACTTGGTTCGAAGTTACAAGAGAAGCTTCAATGGTTTTGTTGCTAGACTCAATGATCAACAAAGAGAAAAGCTCGCAAACATGGAAGGTGTGGTCTCTGTTTTCCCAAGCCAAAAACTTCACCTCCAAACCACCAGATCGTGGGACTTTGTGGGACTACGCCAATCAATTACAAGAAAACCAAAAGTTGAGAGTGATGTGGTGATTGGGGTCATCGATTCCGGAATTTGGCCAGAATCTGAAAGTTTCAGTGATGCAGGTTTTGGTCCAATTCCAAAGAAGTGGAAGGGCACTTGTGCAGGTGGTCATAACTTTACTTGCAATAGGAAAATCATTGGAGCACGAAACTATGACGCTGGTAATCTTGGAGATGGCAGTGTAAGAGATGTTGAAGGTCATGGAACTCACACAGCTTCAACAGCAGCTGGAAATGAGATAAAAGGTGTGAGCTTTTATGGGCTTGCACAAGGTTATGCTAGAGGGGGAGTCCCATCTGCTAGGATTGCTTCATACAAAGTTTGCCAACCTGATGGGTGTGATAGTGCTGATGTGTTATCTGCTTTTGATGATTCCATTGCTGATGGAGTTGACATTATCTCCATCTCACTTGGGGGATTCTTTCCCACTGACTTTGTGGAAGATACTATTGCCATTGGTGCTTTTCATGCTATGGAGAAAGGGGTTCTCACTGTGCACTCTGCAGGAAATGATGGTCCTTCTCCTAGTACTGTATATAGTGCAGCCCCTTGGTTACTATCTGTTGCAGCAAGTAGCATCGATCGCCAATTCATTGACAAGGTAGTTCTTGGGAATGGTAAGATGTTAACAGGAAGGTCAGTGAATACTATCATGTCAAATGGCACAAAAGTTCCTATACTTGGACATAATGGTGAAGGAACAACTACTTGCAAGGGAGAGGATGCAGAAAATTGTGCATGTATGAATAACCAGCTAGCAAAGGGAAGAATTATTTTATGTGGAGTGCCTCAGGGAACAGAAACTGCTTATATAGATGGTGCATTTGGTTCAATCACAACGGATGATTTCATTAGTGATGTGTCTTTTGTGACTTATTTCCCTTCTCTGTTCTTAAGTTCAAAAGATTATGATTTTATCAAGTCATACGCTAATTCAAGTAAAAATCCACAAGCTGAAATATTGAAGAGTGAGATCTTTGAAGATGGCAATGCTCCTTTAGTTGCAAGTTTCTCTTCAAGGGGGCCAAATCCCTTAGTTTCAGAGATTTTGAAACCAGATATAAGTGCCCCAGGGGTGGATATCTTGGCTGCATATTCACCTGAAGCATCACCTTCAGGGTCTCCAAATGACAAGAGAAAGGTAAAATACAACATACTCTCTGGAACCTCTATGTCTTGTCCCCATGTTGCTGGAGTATCTGCATATGTGAAATCATTTCACCCAGATTGGTCACCAGCAGCCATCAAATCAGCTATTATGACCACAGCTCAACCCCTTAATGGTACATATAATTTGACTGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACAACAAGCTGTTGACCCTGGACTTATTTATGACATTTCTAAGGAAGATTATGTGCAAATGCTTTGCAACTATGGTTATGATGCTGAAAAAATTAAAAAGATTGCTGGAGGAAATTCAACCTGTCATGGAGCCTCTGATAGATCTCTAGTGAAAGACATAAATTATCCTGCATTGGTGATTCAAGTTAAGCCTTTGAAGCCATTCACTGTTCAACTTAATAGAACAGTGACAAATGTCGGCCTTCCCAACTCAAAATACAAGGCTACTGTCTTCCCTAATTCAAAACTCAACATTAAGGTGGAGCCTAAGCTTTTGTCCTTCAAATCATTGAATGAGAAACAATCCTTTGTTGTCACTGTTGTTGGAGGAGCAAAACCAAAAGAAAAAGTGTTTACCTCATCACTTGTATGGTCAGATGGCACCCATAGTGTGAAGAGTCCTGTTATCGTGCTATGA 2079 0.4127 MGSLPKGTYSPTSHHLSLLQQVMNKSDVASHLVRSYKRSFNGFVARLNDQQREKLANMEGVVSVFPSQKLHLQTTRSWDFVGLRQSITRKPKVESDVVIGVIDSGIWPESESFSDAGFGPIPKKWKGTCAGGHNFTCNRKIIGARNYDAGNLGDGSVRDVEGHGTHTASTAAGNEIKGVSFYGLAQGYARGGVPSARIASYKVCQPDGCDSADVLSAFDDSIADGVDIISISLGGFFPTDFVEDTIAIGAFHAMEKGVLTVHSAGNDGPSPSTVYSAAPWLLSVAASSIDRQFIDKVVLGNGKMLTGRSVNTIMSNGTKVPILGHNGEGTTTCKGEDAENCACMNNQLAKGRIILCGVPQGTETAYIDGAFGSITTDDFISDVSFVTYFPSLFLSSKDYDFIKSYANSSKNPQAEILKSEIFEDGNAPLVASFSSRGPNPLVSEILKPDISAPGVDILAAYSPEASPSGSPNDKRKVKYNILSGTSMSCPHVAGVSAYVKSFHPDWSPAAIKSAIMTTAQPLNGTYNLTGEFAYGSGNVNPQQAVDPGLIYDISKEDYVQMLCNYGYDAEKIKKIAGGNSTCHGASDRSLVKDINYPALVIQVKPLKPFTVQLNRTVTNVGLPNSKYKATVFPNSKLNIKVEPKLLSFKSLNEKQSFVVTVVGGAKPKEKVFTSSLVWSDGTHSVKSPVIVL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00060 692 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Sebi160g00060 692 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Sebi160g00060 692 PRINTS Subtilisin serine protease family (S8) signature 159 172 IPR015500 -
Sebi160g00060 692 FunFam Subtilisin-like protease SBT1.5 96 302 - -
Sebi160g00060 692 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Sebi160g00060 692 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 690 IPR045051 -
Sebi160g00060 692 ProSiteProfiles Serine proteases, subtilase domain profile. 77 545 - -
Sebi160g00060 692 Pfam Peptidase inhibitor I9 10 72 IPR010259 -
Sebi160g00060 692 Gene3D - 562 692 - -
Sebi160g00060 692 Gene3D - 290 423 - -
Sebi160g00060 692 Pfam Subtilase family 95 522 IPR000209 GO:0006508|GO:0008236
Sebi160g00060 692 SUPERFAMILY Subtilisin-like 94 546 IPR036852 GO:0004252|GO:0006508
Sebi160g00060 692 CDD PA_subtilisin_like 297 416 - -
Sebi160g00060 692 Pfam Fibronectin type-III domain 593 691 IPR041469 -
Sebi160g00060 692 CDD Peptidases_S8_3 70 519 IPR034197 -
Sebi160g00060 692 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Sebi160g00060 692 Gene3D Peptidase S8/S53 domain 96 558 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00060 Sebi-Chr160 1113254 1115842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00060 1 691 Subtilisin-like Serine Gene Family AT5G59100 55.857 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00060 - - psat:127076787 862.833