Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00030 ATGACTGGTATGAATACTGAATCTGCGATGGGGTCAGAGATGTTTACTGATGAAAACGCCAATGTAGAGGATGCTCATGATTCTACAAGTGATAATGGGGATATTAGTGATAGTGATGGTGAATCAGAGGAATCAAATGAAGAAGATAATGAAGAAAGGAATGCTAACTGTACCAATGAGCAACAAATGGATGTGTTTAAGATTGATTCTGTTGTGGAGTTAGAGGAAATTGGTTTTAGTAGTATGACTGCAAATGAGGTGCACCTTTATCATTTCAGTTCACTACACGTGGCCTTTAAATTCTATAGTAAGTATGTAGAGAAAAAGGGATTTCCAACGAGGAAATGGAATACCGTGGTGAACAAGAAAGGTGACGTGACTCAACAAACCTTTGTTTGTTTTAAGGAGGGATATCGTCTCAAGAAACATTTGATAAGAAAAGACCGAAAGAGAGAGGCTAGAGCAATGACACGTTGTGGTTGTAATGCTTTCTTCCGTGTGCGTAAGGATGTAGGCACAGGTCGTTGGCATGTAAAAGCCTTTGTGGATGATCATATCCACGAACTGTTGGTAGAGAAATTTGTTGGGATGTTACCTATCCATAGAAAGATGCACGAATGTGACATCAATCAAATGAATAGCATGAGAGATGCAGGTTGGCCTTTAGGAAACGGGACATGTATAATGAAATTGAAAGACAAAGGCGGAAGCAGATTCAGAAGGAGATGCATGTTAGGTGACTATGATGTTGGTAGATTCCGGACTAAGTGGGAGGAATTGATTATGGAGTTTGAATTGCAAGGTGTGAGGGGATGCATTCTCAGGCAAAGGGAGTTGGAGGCTGACTTTGAGTCGATTGTCGGTGAGCCTGTATTGGTCACACCATTTGAAGACATTGAGAGATGTACAACCAGAATCTACACAAGGAAGGTATTTCTTATATTTAGGTCAGTGTTGGAGAAGTCTTCTAATGTGAAGGTGGTTTCTTGTGAGCAAACTCCAAATTGTTGGATATACATTGTGTGCAAGAGGGCATTTCCCACGCATCAGTGGTATGTTTCTTTGGTGCATCCAGGAGTAGAGCTAAAATGCTCTTGTTTGAGAATGGAGTCTATGGGGATTCCTTGTGAACATGCAATTGTCGTGTTGCATTACTTGGAGATAAGGGATTGCCTGATTCTCTTCTCTATGTGGCGATCTCAAGTGATGGGACTCTTATTTGATTGTTATGATGTGTGCAAGCTTGCTGGTACAAGTGTCTCTAGTCTAGAATTATCAAAGCAGTATGTTAAGGAATTGTTGCAGAAGTTAAGGGAATCCTCACACCCAATAAATGAGGAGCGTGCCAATCCAAGTGATGAGGATGATGTTAGTGTAAGGGATCCGACACGTGTTAGGAGCAAAGGGTGTGGATCTAGGAATAATGCAGGTTATGCTGGGAGGCGCAATAGGCGAACTACTTGTTGTAGTATTTGTCAAGCCCCCGGTCACAACAAAAAAACATGTCCCATGCGAAGAGTTAATGATGATGGTGGCCCATCAAACAATCGTGAGGACGTGTAG 1563 0.4165 MTGMNTESAMGSEMFTDENANVEDAHDSTSDNGDISDSDGESEESNEEDNEERNANCTNEQQMDVFKIDSVVELEEIGFSSMTANEVHLYHFSSLHVAFKFYSKYVEKKGFPTRKWNTVVNKKGDVTQQTFVCFKEGYRLKKHLIRKDRKREARAMTRCGCNAFFRVRKDVGTGRWHVKAFVDDHIHELLVEKFVGMLPIHRKMHECDINQMNSMRDAGWPLGNGTCIMKLKDKGGSRFRRRCMLGDYDVGRFRTKWEELIMEFELQGVRGCILRQRELEADFESIVGEPVLVTPFEDIERCTTRIYTRKVFLIFRSVLEKSSNVKVVSCEQTPNCWIYIVCKRAFPTHQWYVSLVHPGVELKCSCLRMESMGIPCEHAIVVLHYLEIRDCLILFSMWRSQVMGLLFDCYDVCKLAGTSVSSLELSKQYVKELLQKLRESSHPINEERANPSDEDDVSVRDPTRVRSKGCGSRNNAGYAGRRNRRTTCCSICQAPGHNKKTCPMRRVNDDGGPSNNREDV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00030 520 Pfam SWIM zinc finger 361 386 IPR007527 GO:0008270
Sebi160g00030 520 MobiDBLite consensus disorder prediction 1 15 - -
Sebi160g00030 520 ProSiteProfiles Zinc finger SWIM-type profile. 352 387 IPR007527 GO:0008270
Sebi160g00030 520 PANTHER OS01G0519700 PROTEIN 90 206 - -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 441 480 - -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 34 50 - -
Sebi160g00030 520 SMART 26again6 362 389 IPR006564 GO:0008270
Sebi160g00030 520 MobiDBLite consensus disorder prediction 502 520 - -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 19 33 - -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 441 467 - -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 500 520 - -
Sebi160g00030 520 Pfam FAR1 DNA-binding domain 100 190 IPR004330 -
Sebi160g00030 520 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00030 Sebi-Chr160 495257 498256 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi160g00030 FAR1 4.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00030 - - adu:110280242 149.828