Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00021 ATGGAGCGGGTTGCAGAGCCGAAGGTACTTCCTCGAACCTTGCCTATCCTACTTGAGGTATCATCACATTCTGCTGCGGCAAGAGAGACAGGTCAGAGACTCAATGGGCAGGGGGTTTCAAGTGCTGAGGGAATTTCAGCAAGAGAAGTGAATCAATTTTCAAAAGCAAGGGAGGTACCCATCTCACGTTTGGCCTCCATCAGAGAAGTGGCTCAATTATCAAATGCTAGGATATATTTGGTAAGAGAAGATATGGGGTTTGATACTAGAGGCTCTCAAGAATCTCTCTCCTTTGCGCCTTCTAGAACATGGAAAGGAAAGGCCTCTTTAGCAGAATCAGAAGAATTGATAACTGATGTTGAGACGTTGAAGGGCAGCAGTGATTCATTTGAGGATGGTGATCCAAGTTTATTTGCTGGTGCTAGTCATCCCCCAGAACCTATTGATACAGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTACATGCTTAATTAAGAATGTATCCTCCATGAAGGGTCCTTTCCTGGAAGATCTTTCAATTCGTGTTCCTGCCAAGAAACCCAGTCCAGCTGTTCTTTCCCCTGAAGAAAGTCTGGTTGAGGAACTAAATGACACAGGGAACTTATCCTCACCATTTTCAGGTCCTCGAGCATCACAGAACACAGAGAACTCTCCCCTTGCTCCAGATTCTGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTGTTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCCAGTACATATCGGAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTGTGATAGTACTAAGGGGAGTGTAAGGGGGGATTCACTAGAGAGTGCAAAAACTAGTGCTAGTCGGGCAAGTGATAGCAGTGGCATTAGTGATGATAGCAACTGGAGCAACATTACTGGTGGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAGCGACTTGGATGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCGATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATACTGCAATTGCTGGACCATCCATTTCTGCCAACTTTGTATACACATTTTGAAACTGACAGATTCTCCTGTTTAGTAATGGAATATTGTCCTGGGGGTGATCTACACACCTTAAGGCAGAGGCAACCTGGGAAACATTTCTCTGAATATGCTGCACGGTATGCTTTATATCTACACAGTTACATTCCTCTACTTAATCTCTTTGTTAATTGCTTACCATCATGA 1473 0.4386 MERVAEPKVLPRTLPILLEVSSHSAAARETGQRLNGQGVSSAEGISAREVNQFSKAREVPISRLASIREVAQLSNARIYLVREDMGFDTRGSQESLSFAPSRTWKGKASLAESEELITDVETLKGSSDSFEDGDPSLFAGASHPPEPIDTDLMRTVYVPIGQNKSEATCLIKNVSSMKGPFLEDLSIRVPAKKPSPAVLSPEESLVEELNDTGNLSSPFSGPRASQNTENSPLAPDSEEKECVWDASLPPSGNVSPLSSIDSVGVVTAMSIANSCASTYRSDAITSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGISDDSNWSNITGGANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARYALYLHSYIPLLNLFVNCLPS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00021 490 Gene3D Phosphorylase Kinase; domain 1 360 472 - -
Sebi160g00021 490 PANTHER FLIPPASE KINASE 1-RELATED 122 470 - -
Sebi160g00021 490 MobiDBLite consensus disorder prediction 298 343 - -
Sebi160g00021 490 MobiDBLite consensus disorder prediction 298 338 - -
Sebi160g00021 490 ProSiteProfiles Protein kinase domain profile. 366 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00021 490 Pfam Protein kinase domain 367 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00021 490 SUPERFAMILY Protein kinase-like (PK-like) 348 472 IPR011009 -
Sebi160g00021 490 MobiDBLite consensus disorder prediction 193 241 - -
Sebi160g00021 490 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
Sebi160g00021 490 MobiDBLite consensus disorder prediction 207 233 - -
Sebi160g00021 490 SMART serkin_6 366 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00021 Sebi-Chr160 279303 280775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00021 1 470 AGC Kinase Gene Family AT2G44830 59.917 6.23e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi160g00021 Pkinase 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00021 - - lja:Lj0g3v0245699.1 772.696