Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00020 ATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTGTTGGTTCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTCTCCCTCCGGTGTGCCGTTTCACCAACTCTTATTAGAACTTCCTACGACAGTGACCCTTCAAAACGGGCTGGTGGTACATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTATGCATCCAACCTGCATGTTTTATTCCTAGGTTCTTTCCTCAGAAAAACAAAAAGTCACGGAAGCCAAGAGCTGAACCTGGATTGCCTTCCAACACACTTCCAGAGCTTGTTGCTGAGCCTACTTCAGCTCGATCTATGTCCTTTGTGGGCACCCATGAATACCTTGCCCCTGAAATTATTAAAGGGGAAGGCCATGGCAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAACTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCTACACTTTTCAATGTGGTAGGTCAGCAGCTCAAGTTTCCTGAATCACCTGCAACCAGTTATGCCAGCCGGGATCTGATCCGTGGCTTGCTGGTGAAGGAACCACAGCATCGTCTTGGGGTTAAGAGGGGAGCAACTGAGATCAAGCAGCACCCCTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCGAGACCAGTAGAAAATGAGCTACCAGGGAAGGTAGGACCAGTTGATAATACTGTTGGGGTTGGCAGCACTAGTAAGAGGATTGTAGGTAGTGGTACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA 840 0.4595 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDSDPSKRAGGTFCVQPACIEPSSVCIQPACFIPRFFPQKNKKSRKPRAEPGLPSNTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENELPGKVGPVDNTVGVGSTSKRIVGSGTDMKSGGKYLDFEFF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00020 279 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Sebi160g00020 279 Pfam Protein kinase domain 113 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00020 279 PANTHER FLIPPASE KINASE 1-RELATED 1 238 - -
Sebi160g00020 279 FunFam serine/threonine-protein kinase D6PK-like 111 234 - -
Sebi160g00020 279 Gene3D Transferase(Phosphotransferase) domain 1 111 233 - -
Sebi160g00020 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Sebi160g00020 279 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00020 279 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi160g00020 279 SUPERFAMILY Protein kinase-like (PK-like) 3 239 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00020 Sebi-Chr160 277414 278253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00020 1 279 AGC Kinase Gene Family AT2G44830 77.931 5.05e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi160g00020 Pkinase 8.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00020 - - gmx:100803708 533.102